Gene Pcar_1270 details

Gene Information

• Locus tag: Pcar_1270
• Symbol: gmhA
• ID: 3723611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1491223
• End bp: 1491813
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637750859
• Product: phosphoheptose isomerase
• Protein accession: YP_356689
• Protein GI: 77918874
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: 84
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACAG TCGCTATACA AACATATTTT CAGGAATTGC GGGATGTGGT TGATCGGGTT 
GGCCGTGAAA AGGTCGACCA GATTCGGCAG AGCGTTCAAC TTTTGACGGC GTGCCTGCGT 
TGCGGCGGTA AGGTTCTGAT CATGGGCAAC GGCGGTTCCG CGGCGGATGC ACAGCATTTT 
GCCGCGGAGC TTGTGGGTCG GTTTCTTATG GAACGCAAGG CTTTGCCCTC CATCGCTTTG 
ACCACCGATA CGTCCATTTT GACGGCGGTG GGCAACGATT ACGGGTTTGA TGAGATTTTT 
AAACGCCAGA TCGAAGCTCT TGCCGATCCT CGGGACGTGG TTATCGGTCT CAGTACCAGC 
GGGATGTCGA ACAATGTATT TCATGCTCTG ACGGCGGCTA ATCAGGTTGG CTGCAAAACC 
ATCGGTCTGC TTGGGCGCGA AGGCGGCAGC ATTGCATCCA TCGTCGATGT CAACCTGACG 
GTACCGGAGC ATCATACCCC TTATATTCAG ACAGCGCATG GGGCGGTATT GCACCTGTTT 
TGCGATCTGC TGGAAAAGGA ATTGTTTACC CCGTCCGGGC AAACGGAGTA A 

 

Protein sequence

MTTVAIQTYF QELRDVVDRV GREKVDQIRQ SVQLLTACLR CGGKVLIMGN GGSAADAQHF 
AAELVGRFLM ERKALPSIAL TTDTSILTAV GNDYGFDEIF KRQIEALADP RDVVIGLSTS 
GMSNNVFHAL TAANQVGCKT IGLLGREGGS IASIVDVNLT VPEHHTPYIQ TAHGAVLHLF 
CDLLEKELFT PSGQTE