Gene Pcar_1261 details

Gene Information

• Locus tag: Pcar_1261
• Symbol: lpxK
• ID: 3723641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1482171
• End bp: 1483244
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637750850
• Product: tetraacyldisaccharide 4'-kinase
• Protein accession: YP_356680
• Protein GI: 77918865
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1663] Tetraacyldisaccharide-1-P 4'-kinase
• TIGRFAM ID: [TIGR00682] tetraacyldisaccharide 4'-kinase

Plasmid Coverage information

• Num covering plasmid clones: 93
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAGC TGGCTCTATT TTATCGGCAT CTGGCAGTCA AGGGTCCGTG TTCCCCGCTG 
GAATGGCTGA TCTTTGCATT TTTGCTGCCG CTGGGATGGC TTTATGGTGC AGTCATGCGC 
CTGCGGGCCT TGTTCTACCG CATCGGCTGG TTTGATGCCT ATTGTGCGGA TGTTCCGGTT 
ATTTCCGTCG GTAATCTGAG CGTGGGGGGG ACCGGGAAAA CGCCGGTTGT CGATTACCTG 
ATCCGCTATT GCCGGTCGCT GGATAAGCGC GTGGCGGTTG TCAGCCGCGG TTATGCCGGC 
GGCAAAGGGG CCGCGCTGCG TGTTGTCTGC GCCGGGCAGG GTCCAATACT CGATGTTCAG 
CAGGCCGGCG ATGAACCCTG GTTGCTGGCC CGTCGCAATC CCGCAGCCAT TGTTATCGTC 
GCGCCGCATC GTGCTCAAGG GGTGCGTCAT GCGGTTGAAA ATCTCGGTGC CGAGGTGGTG 
TTGCTGGATG ACGGTTTTCA GCATCTGGCC GTGTCCAGAG ATTTTGACCT GGTACTGCTC 
GATGCCTTGC GGCCTTTCGG TAATGGGCAG GTATTGCCGG CCGGGCTTTT GCGCGAGCCA 
GTCTCTGCGC TGAGGCGGGG TGACCTGTTT GTTTTGACGC GCTGTCCGGA AGATTTGGCC 
GGTACAGCGG ATGTGCCCGG TCCCGTGGTG CATTGCCGGC ATATTTTGGA AGAGAGCGCT 
GTCGATCTGG ATGGCGAAGT TCGAAGTCTG CGGGAATTGG CCGGGCTGCG TGGCATCGCT 
TTTGCGGGTA TCGCCGAGCC CGAGGGTTTT TTTCGTGAGC TCCAAAGCCA TGGTTTAACT 
TTGACCCGGA CGCTGCATTT TTCGGATCAT GCCGCCTATG ATGAGCGGGC GGCGATCCTT 
TTAAAGGATG CGGCAAAGTC GGGGGATTAT TTTATTACCA CGGAAAAAGA CGCCGTCAAG 
TTGGCGCACA TGACATTACC GTTACCCTGT TTTCAGGTGC CGTTGCGGTT GATGTTTGTT 
GAAACTGGTC AACTGGAACA AAAGCTATCC CCCATTATCA GCAATCAGAG GTGA 

 

Protein sequence

MTKLALFYRH LAVKGPCSPL EWLIFAFLLP LGWLYGAVMR LRALFYRIGW FDAYCADVPV 
ISVGNLSVGG TGKTPVVDYL IRYCRSLDKR VAVVSRGYAG GKGAALRVVC AGQGPILDVQ 
QAGDEPWLLA RRNPAAIVIV APHRAQGVRH AVENLGAEVV LLDDGFQHLA VSRDFDLVLL 
DALRPFGNGQ VLPAGLLREP VSALRRGDLF VLTRCPEDLA GTADVPGPVV HCRHILEESA 
VDLDGEVRSL RELAGLRGIA FAGIAEPEGF FRELQSHGLT LTRTLHFSDH AAYDERAAIL 
LKDAAKSGDY FITTEKDAVK LAHMTLPLPC FQVPLRLMFV ETGQLEQKLS PIISNQR