Gene Pcar_1254 details

Gene Information

• Locus tag: Pcar_1254
• Symbol: fabZ
• ID: 3723634
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1474445
• End bp: 1474888
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637750843
• Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
• Protein accession: YP_356673
• Protein GI: 77918858
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000000000000634701
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTCG AGATTCTTGA TATCATGAAA CTGCTGCCGC ATCGATACCC CTTTCTTCTG 
GTGGATCGCA TCGAAGATCT GGAACCGGGT AAAAGGGCCG TCGGCATCAA GAATGTCACC 
ATCAACGAAC CGTTTTTCCA GGGTCATTAT CCGGGTCATC CCATCATGCC CGGGGTTCTG 
ATCATCGAGG CCATGGCCCA GGTGGGTGGC GCGGTTGCCG CTATCACAGC CGGAGATAAA 
GACGATCAGG TGCCGTATTT CACCGGTATC AATAAGGCGC GTTTTCGTCG GCCGGTAGGC 
CCCGGCGACG TTTTGCAGTT GCAGCTGGAA CTTCTCAGCA GTCGGCGCGG TCTGTTTGTT 
TTCAGCGGAA AAGCTTATGT CGATGGCAAC CTGGTTGCCG AAGCGGAGTT GAAAGCGGTC 
TTTGCACCTC GTTCTCAGGA TTGA 

 

Protein sequence

MTLEILDIMK LLPHRYPFLL VDRIEDLEPG KRAVGIKNVT INEPFFQGHY PGHPIMPGVL 
IIEAMAQVGG AVAAITAGDK DDQVPYFTGI NKARFRRPVG PGDVLQLQLE LLSSRRGLFV 
FSGKAYVDGN LVAEAELKAV FAPRSQD