Gene Pcar_1252 details

Gene Information

• Locus tag: Pcar_1252
• ID: 3723632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1472876
• End bp: 1473391
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637750841
• Product: outer membrane protein
• Protein accession: YP_356671
• Protein GI: 77918856
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2825] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000000000000206392
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TCTTTGGATT TATGTTGGTT GCCATGTTGA TTGCGGCCGC ACCCGCCGCA 
GCCGCCGATG TGAAAATCGG CGTCATCGAC CTGCAGAAAG TTTTGCGGAC CTCTTTGGCC 
GGACAAGCGG CTCAGAAAAA CATTGCCGAA AAAGCCAAGG CTTTCCAGGA AACCATGCAG 
GGCCGACAAA AAGATCTTCA GAAGCTCAAT GCGGATTTCG AAAAACAGAA GATGGTATTG 
TCCAAGGAGG CCGTCGCCGA CAAAGAGCGT GATCTTCAGC AAAAAGTTAA GGATTTTCAG 
CGCTTCGGCA AAGATGCTCA GGAAGAACTG CAGCAGGAAG ACCGCCAGGC AACTACCCGC 
ATTCTTGATG AAGTGGCCAA GGTTGTCAAA GAGATGGGCG CTAAAGCCGG CTACGATGTC 
ATTGTTGAAA AGAGTACAAC CCTTTATACC GCCGACCGTG CCGATTTGAC GGACCAGGTG 
GTGAAAGCCT ACGATAAGCA ATTTAAAGGC AAGTAA 

 

Protein sequence

MKKIFGFMLV AMLIAAAPAA AADVKIGVID LQKVLRTSLA GQAAQKNIAE KAKAFQETMQ 
GRQKDLQKLN ADFEKQKMVL SKEAVADKER DLQQKVKDFQ RFGKDAQEEL QQEDRQATTR 
ILDEVAKVVK EMGAKAGYDV IVEKSTTLYT ADRADLTDQV VKAYDKQFKG K