Gene Pcar_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1250 
Symbol 
ID3723630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1469758 
End bp1470441 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content57% 
IMG OID637750839 
Productputative ATP-binding component of a transport system 
Protein accessionYP_356669 
Protein GI77918854 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.40949e-21 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGGG GGGCTGCTAT GATCGAGGTT ACGAATTTAT GCAAAAGCTT CGTTAGCGGT 
ACCCGTCGGG TTGATGTGCT TTCGCATGTC GATATGAAGA TCGATGCCGG CGAAAGGGTT
GCAGTGGTCG GTGCTTCAGG GGCAGGCAAG ACGTCTCTGA TGCATATCCT TGGAGGCCTG
GATCGCCCCA CCAGCGGCGA TGTCCTATAC GATAAGCAGG ATATCTTCAG TCTCAAGGGG
GCTGGGCTTG ACGATTTTCG CAATCGCACT CTCGGTTTTG TTTTTCAATT CCATCAACTG
CTGCCGGAGT TTACGGCGCT GGAAAATGTC ATGCTGCCGG CTCTGATCGC CCGATGGTCG
CGCGCCAAGG CAAAGTCCGC GGCCAGGGAA CTGCTTACGG AGGTTGGCCT CGAGTCGCGG
TTGAGCCACA AACCGGGGGA ATTATCCGGA GGCGAGCAGC AACGCGTCGC CATCGCACGG
GCGTTGGTCG GGTCGCCCCG GGTGCTGTTT GCCGATGAGC CGACCGGCAA TCTTGACAGC
AATACCTCCG AAAGCATTTA TCGGTTGTTG TCCAGGCTGC ATGAGACCCG TGGACTTACT
CTGTTTATCG TTACACATGA CGCCCGTCTT GCGGCTGGCC TCGATCGTGT CGTGCATATG
GCAGATGGCC GAATTACCGG CTAG
 
Protein sequence
MSRGAAMIEV TNLCKSFVSG TRRVDVLSHV DMKIDAGERV AVVGASGAGK TSLMHILGGL 
DRPTSGDVLY DKQDIFSLKG AGLDDFRNRT LGFVFQFHQL LPEFTALENV MLPALIARWS
RAKAKSAARE LLTEVGLESR LSHKPGELSG GEQQRVAIAR ALVGSPRVLF ADEPTGNLDS
NTSESIYRLL SRLHETRGLT LFIVTHDARL AAGLDRVVHM ADGRITG