Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1250 |
Symbol | |
ID | 3723630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1469758 |
End bp | 1470441 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637750839 |
Product | putative ATP-binding component of a transport system |
Protein accession | YP_356669 |
Protein GI | 77918854 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 3.40949e-21 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAGGG GGGCTGCTAT GATCGAGGTT ACGAATTTAT GCAAAAGCTT CGTTAGCGGT ACCCGTCGGG TTGATGTGCT TTCGCATGTC GATATGAAGA TCGATGCCGG CGAAAGGGTT GCAGTGGTCG GTGCTTCAGG GGCAGGCAAG ACGTCTCTGA TGCATATCCT TGGAGGCCTG GATCGCCCCA CCAGCGGCGA TGTCCTATAC GATAAGCAGG ATATCTTCAG TCTCAAGGGG GCTGGGCTTG ACGATTTTCG CAATCGCACT CTCGGTTTTG TTTTTCAATT CCATCAACTG CTGCCGGAGT TTACGGCGCT GGAAAATGTC ATGCTGCCGG CTCTGATCGC CCGATGGTCG CGCGCCAAGG CAAAGTCCGC GGCCAGGGAA CTGCTTACGG AGGTTGGCCT CGAGTCGCGG TTGAGCCACA AACCGGGGGA ATTATCCGGA GGCGAGCAGC AACGCGTCGC CATCGCACGG GCGTTGGTCG GGTCGCCCCG GGTGCTGTTT GCCGATGAGC CGACCGGCAA TCTTGACAGC AATACCTCCG AAAGCATTTA TCGGTTGTTG TCCAGGCTGC ATGAGACCCG TGGACTTACT CTGTTTATCG TTACACATGA CGCCCGTCTT GCGGCTGGCC TCGATCGTGT CGTGCATATG GCAGATGGCC GAATTACCGG CTAG
|
Protein sequence | MSRGAAMIEV TNLCKSFVSG TRRVDVLSHV DMKIDAGERV AVVGASGAGK TSLMHILGGL DRPTSGDVLY DKQDIFSLKG AGLDDFRNRT LGFVFQFHQL LPEFTALENV MLPALIARWS RAKAKSAARE LLTEVGLESR LSHKPGELSG GEQQRVAIAR ALVGSPRVLF ADEPTGNLDS NTSESIYRLL SRLHETRGLT LFIVTHDARL AAGLDRVVHM ADGRITG
|
| |