Gene Pcar_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1243 
Symbol 
ID3723623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1460296 
End bp1460850 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content53% 
IMG OID637750832 
Producttranscriptional regulator 
Protein accessionYP_356662 
Protein GI77918847 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones84 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGA AAATCCGCGA AATCGCTTCC CGCGTACGTG AATTGCGCGA ACTGTCCGAG 
ATATCCGTAG AGCAGATGGC GGATAGTCTC AACCTTCCCA TTCTCACCTA CCAACGCTAC
GAAAACGGCA GTGAGGATAT CCCCGCCAGC ATCCTGTATA AAATCGCCAC CGACCTGAAA
GTCGACATGG GCCTGCTTTT GACGGGCGAC ATGCCGCGCA TGCACATCTT CACCGTAACC
CGCAAAGACA AAGGGGTCGC GGTGGAGCGT CGCAAACAGT ACAGCTACCA GAATCTCGCG
GCCAATTTTA TTCATAAAAA AGCCGAACCT TTTCTGGTCA GCGTCGATCC GCGGCCGCAG
GGCGATGCTC CACAGCGAAA CGCCCACCCC GGTCAGGAAT TCAATTTCCT TTTGGAGGGC
CGGCTCAAAA TCTATATTCA CAACAATGAA ATCGAACTCG AGGAAGGCGA TTCCATCTAT
TTCGATGCCA ACTACGAACA TGCCATGGAG GCTCTCGATG GTCGCCCGGC AAAATTTCTG
GCCATCATCC TGTGA
 
Protein sequence
MQQKIREIAS RVRELRELSE ISVEQMADSL NLPILTYQRY ENGSEDIPAS ILYKIATDLK 
VDMGLLLTGD MPRMHIFTVT RKDKGVAVER RKQYSYQNLA ANFIHKKAEP FLVSVDPRPQ
GDAPQRNAHP GQEFNFLLEG RLKIYIHNNE IELEEGDSIY FDANYEHAME ALDGRPAKFL
AIIL