| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1226 |
|---|
| Symbol | |
|---|
| ID | 3723645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1437886 |
|---|
| End bp | 1439007 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637750815 |
|---|
| Product | glycerate kinase |
|---|
| Protein accession | YP_356645 |
|---|
| Protein GI | 77918830 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1929] Glycerate kinase |
|---|
| TIGRFAM ID | [TIGR00045] glycerate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0038479 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TTGTAGCTTG CGATGCATTC AAGGGCAGCC TTTCTGCGCA ACAAGCCTGC
CGTACCGTTG CCTCAGGCAT ATCTGCCGTA GAGCCGGACT GGCGTCTGAC CTCGGTGCCG
CTGGCTGATG GCGGTGAAGG GACCGCGGAG ATCCTGGTAG CCGCAGCCGG GGGCTCCTGG
GTCGAGGTGC CGGATGTCAT GGGACCGCTG CCGGAGATGA CTCTGACGGC AGCCTACGGT
TGTCTTGAGC AGCGTCGGGC AGCTGTGGTG GAAATGGCTC GCTCCAGCGG CCTGGTGCTG
CTGAGAGGCG ATCAGCGCCA CCCTTTGCAA ACCACGACCT ACGGTGCCGG ACAGCTTTTA
TCGGCAGCCA TCAAAAGCGG AGTGACGCAT GTCCTGTTGA CGTTGGGCGG CAGCGCTACG
GTCGATGGTG GTACCGGTGC CGTGCGCGCC CTCGGTTGGC GGTTTCTTGA TGCCGGCGGC
AAGGATATTC CTCTCGGTGG TGGGGGCTTG ATCCATTTGC AACGCATTGT GCCATCCAGC
CTGTCCTTAC CCCGCATTAC CGTATTGTGC GATGTGACCA ATCCCCTTTG CGGCCCGCAG
GGCGCAGCCC AGATCTTCGC TCCACAAAAA GGGGCCACCC CGGCACAGGT TGCCATGCTG
GCGGAGGGGC TGGAAAATCT GGCCCGGAGG ATCAAAGACC AACTTGGTAT CGATGTGGCG
CATCTGCCGG GAGGCGGAGC GGCCGGAGGT TTCGGTGCAG GTGCGCAGGT CTTTATGGGG
GGGCGTCTGA TACCGGGTGT TTCCGCTGTG ATGGAGCAGG TTCAATTCGA GCGGCAATTG
GGTCAGGCCG ACTGGGTGAT TACCGGTGAA GGCTGTCTCG ATCGCACCTC CCTGCAGGGG
AAAGTGGTTA GCGGAGTGCT TGACGCAGCC CGCCGGCAGG GAGTACCGGT GGCGGTGCTT
GCAGGACAGA TACGCTTGAC TGCGGAGGAA TTGCAGCAGG CCGGTATTCG TCATGCTGTG
GCGGCCATGC CGCAGGATAT GCCTTTGGAC GAGGCTCTGA CGCGTGCGCC TGAATTGCTC
GGGAAGGCTG CGCGGTCGCT TTCGGCCAGG ATGCATGGGT GA
|
|---|
| Protein sequence | MRILVACDAF KGSLSAQQAC RTVASGISAV EPDWRLTSVP LADGGEGTAE ILVAAAGGSW
VEVPDVMGPL PEMTLTAAYG CLEQRRAAVV EMARSSGLVL LRGDQRHPLQ TTTYGAGQLL
SAAIKSGVTH VLLTLGGSAT VDGGTGAVRA LGWRFLDAGG KDIPLGGGGL IHLQRIVPSS
LSLPRITVLC DVTNPLCGPQ GAAQIFAPQK GATPAQVAML AEGLENLARR IKDQLGIDVA
HLPGGGAAGG FGAGAQVFMG GRLIPGVSAV MEQVQFERQL GQADWVITGE GCLDRTSLQG
KVVSGVLDAA RRQGVPVAVL AGQIRLTAEE LQQAGIRHAV AAMPQDMPLD EALTRAPELL
GKAARSLSAR MHG
|
|---|
| |