Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1222 |
Symbol | dnaE |
ID | 3723680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1430419 |
End bp | 1433889 |
Gene Length | 3471 bp |
Protein Length | 1156 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637750811 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_356641 |
Protein GI | 77918826 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 69 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG TGCCTTTTGT ACACCTCCAC GTTCACACCC AATACAGCCT TCTCGATGGC GCCATTCGCA TAGGTGACCT GATCAAACGT GCCGAAGACT GCGGTATGCC GGCCGTCGCC ATTACCGATC ATGGCAATAT GTTCGGTGCC GTCGAATTTT TCAGCAAACT CAAAAAAAGC TCCGTTAAGC CGATTGTCGG TTGCGAAGTC TATGTTGCGC CCGGTTCCCG GTTTGAGAAG AGCAATGTGC GTGGCGGCGA CAAAGCCTAC CATCTGGTGC TTTTGTGTCA GGATATCGAA GGATACCAGA ATCTCTGCCG GATGGTTTCA GCCGGTTACC GCGAAGGTTT TTACTATAAG CCGCGTATCG ACTGGGACCT GCTGCGTAAA TACAATAAAG GCTTGATTGC GCTGACGGCC TGCCTGGGCG GGGAGCTTCC CTCGCTGTTG ATGCAGGGCA AACACGAGCA GGCCGTGGCC CGCGCCCGTG ATATGGCCGC CATATTCGAT GAGAATCGTC TGTATCTCGA ATTGCAGGAG AACTTCATCG CTGAGCAGAA GCCCGTCAAT GAGGGTCTTA TCGCTATCGG CAAAGAGTTG GGACTGCCCC TGGTTGCCAC CAACGATTGT CATTATCTGA CCCGCGAGTC CGCTGCCGCC CATGAAGTTT TGCTGTGCGT GCAGACCGGC AAGACCATGG ATGATCCGGA CCGCTTTCGG TTTTCCAATG ACGAGTTCTA TCTCAAAACG CCTGAAGAGA TGGCCGAACT CTTTCATTAT GCACCCGAGG CCCTGGCCAA TACCGTTGCG ATTGCCGATC GCTGTAACCT GGAACTCGAT TTCGATACCT ACCATTTTCC CCAGTACGAA AAACCGGCCG AAAAGACCCT CGATCAGGTG CTGGAAGAGG ATTCCTGGCG CGGTCTGGAA GAGCGCCTGG CCGAAATCCG CAAGGTTCGT CCCGATTTTT CCGCCGAAGA GGAAAAAGTC TACCACGACC GGTTGGTACG GGAACTCGAA TGTATCAACA GCATGGGGTT CCCGGGTTAT TTCCTGATCG TGGCCGATTT TATCAACTGG GCCAAGGATA ACGGGATCCC CGTCGGTCCC GGTCGCGGCA GTGCCGCCGG TTCGCTGGTA GCTTACGCCA TTCGCATCAC CGATATCGAT CCCATTCCCT ATAATCTGCT GTTTGAACGT TTTCTGAACC CCGAGCGCGT CTCGATGCCT GATATCGACG TCGATTTCTG CATCTACGGG CGGGAAGATG TTATCGAATA CGTGCGGCAG AAGTACGGCG AGGAAAACGT CGCCCAGATT ATCACCTTCG GTACCATGAT GGCCAAGGGG GTGATCCGTG ATGTGGGGCG GGCCCTCAAT ATGTCCTACG GCGATGTCGA TCGAATCGCC AAGCTCGTAC CCACGGTGCT CAATATCACC CTCAAGGAAG CCCTGGAACA GGAACCGCGT CTGCAGGAAT TGCAGGACAA GGATCCCCAG GTCAAACAAC TTCTCGATAT CGCCCTTACG CTGGAAGGTC TGACCCGGCA TGCGTCCACC CATGCCGCCG GCGTGGTGGT TACCCCCAAG CCGTTGTCCG AATATCTGCC GTTGTACACC GATCCGAAAT CGGGCGGCCA GGTTACCCAG TTCCCCATGA AATACGTGGA GCAGATCGGG CTGGTCAAGT TCGACTTCCT CGGTTTGAAG ACGCTGACCG TTATCGCCAA CGCGGTACGG CTGATTCATG AGGGCAATGA TCCGGAATTT GACCTGAAAC TGGTGGGGGA CGATGATCCC GATACCTATC GGTTGCTGTC GGCCGGTGAA ACCACGGGCG TGTTTCAGCT CGAGTCTTCC GGTATGAAGG AACTGCTGGT CAAGCTCAAA CCGAGTTGTT TCGAGGATAT TATCGCCGTC TGCGCCCTTT ATCGTCCGGG GCCGCTTGGA TCGGGCATGG TCGACGATTT CATTCTGCGC AAACACGGCA AAAAGGAGAT CACCTACGAC TTTCCGCAAC TCGAGCCGAT TCTGAAAGAC ACCTATGGCG TTATCGTCTA TCAGGAACAG GTCATGCTGA TCGCCCAGGT GCTGGCACGC TATTCCCTGG GAGGCGCCGA CTTGCTGCGC CGGGCCATGG GTAAGAAAAA ACCCGAGGAG ATGGCCAAGC AAAAAGAGAT TTTCATGTCC GGCGCCCGGG AGAACGAACT CGATGTCAAA AAGGCCGAGG CGGTCTTCGA TCTCATGGAA AAATTCGCCG CGTACGGTTT TAACAAATCG CATTCGGCGG CGTATGCCCT GGTCGCTTAT CATACGGCGT ATCTGAAGAC CCATTATCCG GTGGAATTCA TGGCTGCTCT GCTGACAGAG GACATGGAAA ACACCGAAAA GGTCATCAAG AACATCAACG AAGTACGCTC TATGGGTATC GAGGTGCTGC CTCCGGACAT CAATGCTTCG AGCAGTTCCT TCACCGTACA CGACAATGCC ATACGGTTCG GACTCGGCGC CGTCAAGGGC GTCGGCGGAG CGGCTATCGA CGCGATACTC GAGGTTCGCC AGGAGCAGCC CTTCACCACT TTGCACGAAT TCTGCGAGCG GGTCGATTTA CGCAAGGTCA ACAAAAAAGT CGTCGAAGCG TTGATCAAGT GCGGAGCTTT CGATTCTTTG GGCGGTCATC GCGCCCAGTA CCTGGTGGTG CTGGAAGAGG CCATGGAAAT CGGCCAGAAG GTGCAGCGCG AAAAGGCGGA GGGGCAGGCA TCCCTGTTCG GTACCGATGA GATTGTATCT CAGCGGGGCA CCAGCTATGG GGTTTTGCCC GAAATGGAGG AATGGTCCGA TAAAGTCAAG CTCGGGTTCG AAAAAGAGTC ACTGGGGTTC TATATCACCG GCCATCCCCT GGGACGCTAT CAGGAGGTCA TACGGCGTTT CGCCAATTGT ACCACCGCCG ACGTTGCTGA ACGGGCCGAC AAGGAAGAGG TGCGATTGTG CGGCATGGTC AGCGGCATCA AGGATCTGGT GACCAAAAAG GGCGAACGCA TGGCTTTTGT GACCCTGGAG GATCTCAGCG GCTTCGTGGA AATGGTGGTA TTTCCCGATA TCTATCGCGA CGCTTCGGAC TCTCTGCACA GCGATCAGCC GCTGCTGGTG ACCGGGACGG TGGAAGTTGC AGAGGAAACA CGCAAACTGA TGCCGAAAGA AATCCTGCCT CTGGCGGAGG TCAGCCGCAA GGAAACCAAA CGGGTGCACT TCAGGTTTCA GGTTCCGGGG CTCGTCGACG ATCAACTGCA TCGTCTCAAG GAGATCATAA TGCGTCATCG GGGCGCTTGC CCGGTGCTCA TGCACCTGGT GATTCCCCAT CGCAGCGAGA CCGTTCTGCG GTTGCCCGAA AGTCTGAAAA TTGCCCCTAC CGATGAAATG ATGGAAGACA CCGAGCGCCT GTTTGGGTAC AATGTGATAA CTTTCGAATA A
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Protein sequence | MEKVPFVHLH VHTQYSLLDG AIRIGDLIKR AEDCGMPAVA ITDHGNMFGA VEFFSKLKKS SVKPIVGCEV YVAPGSRFEK SNVRGGDKAY HLVLLCQDIE GYQNLCRMVS AGYREGFYYK PRIDWDLLRK YNKGLIALTA CLGGELPSLL MQGKHEQAVA RARDMAAIFD ENRLYLELQE NFIAEQKPVN EGLIAIGKEL GLPLVATNDC HYLTRESAAA HEVLLCVQTG KTMDDPDRFR FSNDEFYLKT PEEMAELFHY APEALANTVA IADRCNLELD FDTYHFPQYE KPAEKTLDQV LEEDSWRGLE ERLAEIRKVR PDFSAEEEKV YHDRLVRELE CINSMGFPGY FLIVADFINW AKDNGIPVGP GRGSAAGSLV AYAIRITDID PIPYNLLFER FLNPERVSMP DIDVDFCIYG REDVIEYVRQ KYGEENVAQI ITFGTMMAKG VIRDVGRALN MSYGDVDRIA KLVPTVLNIT LKEALEQEPR LQELQDKDPQ VKQLLDIALT LEGLTRHAST HAAGVVVTPK PLSEYLPLYT DPKSGGQVTQ FPMKYVEQIG LVKFDFLGLK TLTVIANAVR LIHEGNDPEF DLKLVGDDDP DTYRLLSAGE TTGVFQLESS GMKELLVKLK PSCFEDIIAV CALYRPGPLG SGMVDDFILR KHGKKEITYD FPQLEPILKD TYGVIVYQEQ VMLIAQVLAR YSLGGADLLR RAMGKKKPEE MAKQKEIFMS GARENELDVK KAEAVFDLME KFAAYGFNKS HSAAYALVAY HTAYLKTHYP VEFMAALLTE DMENTEKVIK NINEVRSMGI EVLPPDINAS SSSFTVHDNA IRFGLGAVKG VGGAAIDAIL EVRQEQPFTT LHEFCERVDL RKVNKKVVEA LIKCGAFDSL GGHRAQYLVV LEEAMEIGQK VQREKAEGQA SLFGTDEIVS QRGTSYGVLP EMEEWSDKVK LGFEKESLGF YITGHPLGRY QEVIRRFANC TTADVAERAD KEEVRLCGMV SGIKDLVTKK GERMAFVTLE DLSGFVEMVV FPDIYRDASD SLHSDQPLLV TGTVEVAEET RKLMPKEILP LAEVSRKETK RVHFRFQVPG LVDDQLHRLK EIIMRHRGAC PVLMHLVIPH RSETVLRLPE SLKIAPTDEM MEDTERLFGY NVITFE
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