Gene Pcar_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1216 
SymbolsgcX 
ID3723674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1423685 
End bp1424755 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID637750805 
Productputative lyase/synthase 
Protein accessionYP_356635 
Protein GI77918820 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1363] Cellulase M and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0144913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAC ATGCAGTGAG TTTTTTGCAG GAACTCGTCG AAACCCCGAG TCCTTCGGGT 
TTTGAGCAGC CCGTGCAGCG TATCATGCGT CGCGAATTGT CGCCTTTGGC CGATGAGGTG
CGTACCGATG TCATGGGTAA CGTCATTGCC CGTATCGATG CCGCATCCAG TCAGGCCATG
CGGGTGATGC TGGCCGGTCA TTGCGATGAG ATCGGTTTTA TGGTGCGTTA TATCGACGAC
AACGGGTTTA TCTATTTCGC TCCGATCGGA GGCGTCGATG CGCATCTGGT GCCGGGCCAG
CGCGTGCACG TGCATACCGC TGACGGCCCG GTGCTGGGGG TGGTAGGCAA AAAGCCTATC
CATCTCATGG AGCCTAAGGA CCGGGAAACG GTGGTTAAAC TGAACAGTCA GTTCATCGAC
CTGGGCTGTG CCGACGGAGA AGCCGCGCGC AAACTGGTCG CTGTGGGCGA TCCCGTTACT
TTTGCCGTGG GGTTCGAGCG CCTGCAGGGT GAGCTTGCCG CTTCCCGTGG TTTCGATGAC
AAGATGGGCG CCTTCATCGT GGTGGAAGTG TTGCGGGCCG TGCGGCAGCG CGGTGTGCCG
CCGGTGGAAG TTTACGGTGT TTCCACAGTG CAGGAAGAAG TCGGTTTGCG CGGTGCGACG
ACCAGTGCCT TCGGTATCGA CCCTCAGATC GGCATTGCGG TGGATGTCGG TTTCGCCAGC
GATGTTCCCG GGGTGGAAAT GAAGGAAATC GGCGAATTCA AAGTGGGGGG CGGACCGATC
ATTTCCCGCG GTGCCAACAT TAACCCCGCG CTTTTCGACC TGTTGCTACG CACGGCAGAG
GAAGAGGGTA TCCCCTGTCA GATCATGGGC GCGCCACGTG GAACCGGCAC CGACGCCAAT
GTCATGCAGC TGACCCGTGC AGGCGTTGCG GCGGCGCTGG TGCAGGTGCC CCTGCGCTAT
ATGCATTCGC CGGTGGAGGT TTTGTCGCTG GCCGATATCG AGGCCACCAT TCGTCTGTTG
ACGGGGGTGA TTTACCGGCT GGACAGTGAC TTTTCCATTA TTCCTAATTA A
 
Protein sequence
MDEHAVSFLQ ELVETPSPSG FEQPVQRIMR RELSPLADEV RTDVMGNVIA RIDAASSQAM 
RVMLAGHCDE IGFMVRYIDD NGFIYFAPIG GVDAHLVPGQ RVHVHTADGP VLGVVGKKPI
HLMEPKDRET VVKLNSQFID LGCADGEAAR KLVAVGDPVT FAVGFERLQG ELAASRGFDD
KMGAFIVVEV LRAVRQRGVP PVEVYGVSTV QEEVGLRGAT TSAFGIDPQI GIAVDVGFAS
DVPGVEMKEI GEFKVGGGPI ISRGANINPA LFDLLLRTAE EEGIPCQIMG APRGTGTDAN
VMQLTRAGVA AALVQVPLRY MHSPVEVLSL ADIEATIRLL TGVIYRLDSD FSIIPN