Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1216 |
Symbol | sgcX |
ID | 3723674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1423685 |
End bp | 1424755 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637750805 |
Product | putative lyase/synthase |
Protein accession | YP_356635 |
Protein GI | 77918820 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1363] Cellulase M and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.0144913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAC ATGCAGTGAG TTTTTTGCAG GAACTCGTCG AAACCCCGAG TCCTTCGGGT TTTGAGCAGC CCGTGCAGCG TATCATGCGT CGCGAATTGT CGCCTTTGGC CGATGAGGTG CGTACCGATG TCATGGGTAA CGTCATTGCC CGTATCGATG CCGCATCCAG TCAGGCCATG CGGGTGATGC TGGCCGGTCA TTGCGATGAG ATCGGTTTTA TGGTGCGTTA TATCGACGAC AACGGGTTTA TCTATTTCGC TCCGATCGGA GGCGTCGATG CGCATCTGGT GCCGGGCCAG CGCGTGCACG TGCATACCGC TGACGGCCCG GTGCTGGGGG TGGTAGGCAA AAAGCCTATC CATCTCATGG AGCCTAAGGA CCGGGAAACG GTGGTTAAAC TGAACAGTCA GTTCATCGAC CTGGGCTGTG CCGACGGAGA AGCCGCGCGC AAACTGGTCG CTGTGGGCGA TCCCGTTACT TTTGCCGTGG GGTTCGAGCG CCTGCAGGGT GAGCTTGCCG CTTCCCGTGG TTTCGATGAC AAGATGGGCG CCTTCATCGT GGTGGAAGTG TTGCGGGCCG TGCGGCAGCG CGGTGTGCCG CCGGTGGAAG TTTACGGTGT TTCCACAGTG CAGGAAGAAG TCGGTTTGCG CGGTGCGACG ACCAGTGCCT TCGGTATCGA CCCTCAGATC GGCATTGCGG TGGATGTCGG TTTCGCCAGC GATGTTCCCG GGGTGGAAAT GAAGGAAATC GGCGAATTCA AAGTGGGGGG CGGACCGATC ATTTCCCGCG GTGCCAACAT TAACCCCGCG CTTTTCGACC TGTTGCTACG CACGGCAGAG GAAGAGGGTA TCCCCTGTCA GATCATGGGC GCGCCACGTG GAACCGGCAC CGACGCCAAT GTCATGCAGC TGACCCGTGC AGGCGTTGCG GCGGCGCTGG TGCAGGTGCC CCTGCGCTAT ATGCATTCGC CGGTGGAGGT TTTGTCGCTG GCCGATATCG AGGCCACCAT TCGTCTGTTG ACGGGGGTGA TTTACCGGCT GGACAGTGAC TTTTCCATTA TTCCTAATTA A
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Protein sequence | MDEHAVSFLQ ELVETPSPSG FEQPVQRIMR RELSPLADEV RTDVMGNVIA RIDAASSQAM RVMLAGHCDE IGFMVRYIDD NGFIYFAPIG GVDAHLVPGQ RVHVHTADGP VLGVVGKKPI HLMEPKDRET VVKLNSQFID LGCADGEAAR KLVAVGDPVT FAVGFERLQG ELAASRGFDD KMGAFIVVEV LRAVRQRGVP PVEVYGVSTV QEEVGLRGAT TSAFGIDPQI GIAVDVGFAS DVPGVEMKEI GEFKVGGGPI ISRGANINPA LFDLLLRTAE EEGIPCQIMG APRGTGTDAN VMQLTRAGVA AALVQVPLRY MHSPVEVLSL ADIEATIRLL TGVIYRLDSD FSIIPN
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