| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1214 |
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| Symbol | miaB |
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| ID | 3723672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1421571 |
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| End bp | 1422887 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637750803 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_356633 |
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| Protein GI | 77918818 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000000193659 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTT TTTACCTGGA GACCTTCGGG TGCCAGATGA ACGTGGTCGA TTCCGAGCAG
ATCGTCGGCC TTGTGCAAAG CTTGGGATAC AGCTCTGTTG ACAGTCCCGA GCAGGCGAAC
CTTATCATTC TCAATACCTG TTCCATTCGT GCGCGTGCCG AGCGCAAGGT GTACGGTCAC
CTGGGTCGCT TCAAGCCGCT CAAGCAGCGG CGTCCCGAGT TGATCATTGC CGTGTGTGGC
TGTGTTGCCC AGCAGGAGGG GCAGCGCATG CTGGAGAAGG TGCCTTATCT TGATATCGTT
TGTGGTACCC ATAATATACA CCGCCTGGCT GATATGGTGA GGGATGCCGA ACTGCACCGC
GCGCGACATG TCGAGGTCGA TTTTCTCGAA GCCGATAAGC GGCGCCGGCT TTTCCCGGAA
CGGGCACCGA GTGCCGAAGT GTCACGCTTC GTTACGGTTA TTCAAGGATG TGATAATTTC
TGCAGCTATT GCATTGTACC CCATGTTCGC GGCCGGGAGG TCAGTCGCCC CAGTGCCGAA
GTGTTGGAGG AGGTACGCCT GCTGGTCGAG CAGGGTGCGC GCGAGATTAC CTTGATCGGT
CAAAACGTCA ATTCCTACGG CTGCAAGGAG GACGACGAGA TTTCTTTCGC TTCGCTGTTG
CGGAAGGTCG CTGAGGTGGA TGGGCTGGAA CGCATTCGTT TCATGACATC CCACCCCAAG
GATCTGTCGG ATGAGCTGAT CGATTGTTTT GCCGATCTTG ACAAGTTGTG CAAGCATATC
CACCTGCCGG TGCAGGCCGG CGGCGATGCG GTACTCAAGG CCATGCGCCG CGGCTATACG
CGCGACCAGT ATCTGGGTCG TATCGAACGC TTGCGGCGGG TGTGTCCCGA AATCCGGATG
ACATCCGATG TGATTGTCGG TTTTCCCGGT GAAACGGAAA GCGAATTCGA GCAGACCATG
GATCTTCTGG AACGGGCCCG GTTTACCGAA ATCTATTCGT TTATTTTTTC CGCCCGACCC
GGCACTTCGG CTGCCGACCT TCCGGACGAT ATTCCCAAGG AGGTCAAGCA GCAGTGGTTC
GATCGCATGT TGGCCCTGCA GGAAGAGATA ACCCGGCAGT ATCACCAGAT GGATATCGGT
CAGGTTTTGC CGGTGTTGGT CGAGGGCAGC AGTCGGCAGG GCAACGGTCA GCTGTTCGGG
CGCACCACCT GGAACCGCAT TGTAAATTTC GATGGCAATC CCGATCTGGT TGGCCGCATC
GTGCCGGTGC GCCTTACCGT CGCTTATCGC AATTCCCACC TGGGCGAACG GGTCTGA
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| Protein sequence | MKSFYLETFG CQMNVVDSEQ IVGLVQSLGY SSVDSPEQAN LIILNTCSIR ARAERKVYGH
LGRFKPLKQR RPELIIAVCG CVAQQEGQRM LEKVPYLDIV CGTHNIHRLA DMVRDAELHR
ARHVEVDFLE ADKRRRLFPE RAPSAEVSRF VTVIQGCDNF CSYCIVPHVR GREVSRPSAE
VLEEVRLLVE QGAREITLIG QNVNSYGCKE DDEISFASLL RKVAEVDGLE RIRFMTSHPK
DLSDELIDCF ADLDKLCKHI HLPVQAGGDA VLKAMRRGYT RDQYLGRIER LRRVCPEIRM
TSDVIVGFPG ETESEFEQTM DLLERARFTE IYSFIFSARP GTSAADLPDD IPKEVKQQWF
DRMLALQEEI TRQYHQMDIG QVLPVLVEGS SRQGNGQLFG RTTWNRIVNF DGNPDLVGRI
VPVRLTVAYR NSHLGERV
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