Gene Pcar_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1212 
Symbol 
ID3723670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1419582 
End bp1420892 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content59% 
IMG OID637750801 
ProductZn-dependent protease, putative 
Protein accessionYP_356631 
Protein GI116878498 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000776404 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTA TTCATAGGCT GTCGGTTGTT GCTGCGGCCC TGGTCTTGTT GATGGTTGGA 
GGATGTGCCG TCAACCCGGT TACGGGGCGT CAGGAACTCG CTTTGTTCAC CATCACTCCT
TCCCAGGAGA TTCAGCTGGG ACAGGAGGCT TTTCCCAAGG CTGTGCAACA GATGGGCGGC
GAGTATGACG ATCCGGCCTT GGCCGCTTAT GTCAACGGGG TGGGGAAGCG TGTCGCCCAG
GTGGCGGAAC GGCCTGAGTT GCCTTACGAG TTTCGGGTCC TCAACGATTC AACCCCCAAT
GCCTTTGCTT TGCCGGGAGG CTTTGTGGCC ATCACCCGGG GGTTGTTGGT AAGCCTTGAA
AACGAGGCGC AATTGGCGGC CGTACTGGGG CACGAAGTGG GGCATGTGAC GGCTCGCGAT
TCGGTTCAGG GTATGCAGCG TGGCACCTTG CTCGGGGCCG GATTGGCGGT TTTATCCGCA
GCTACCGGCT CCAGCGCTTA CGGTGGCGTG GCCCAGAAGG CCGGTCAGTT GGCTGCCGGC
TTGCTGGATA ATCGCTTCAG TCGCGAACAG GAACGCCAGG CCGATCGTCT CGGTGTCGAT
TATATGGTTC GGGCCGGTTA CAATCCGCGC GGCAGCGTGC AACTGCAGGA ATTCTTCTAT
CGTACCGTCG AGGCGGGCGC CGAACCGATG TGGCTTGCGG GTTTGTTTCG CACGCACCCT
TTTTCCAAAG AGCGTATGTT GGCTTTGGAA GCCTATATTG CCGAGCGCTA CAGTCTGCAG
CAGAGCGACC CACGGTTTGT GTTGAACGAG CAGCCGTTTC AGCGGGCCGT AAGCGGTCTC
AGGCAGTCGA GCAAAGGCTA CGAGCTTTAC GATCAGGCTC GGCAGCAGGA ACAGCAAGGC
CATGTATCGC AGGCGATTGC CACCTATCTG CAAGCTGCCA CGGTGGCGCC GGATCAAGCC
CTGATTCTGA CAGGTTTGGG GATGGCCTAT CTGCATGCCA GGGATGTTCG GGCCGCCCGT
CCGCACCTGG CCCGGGCCGT CCAGTTGGAT GGCAATTACT ATTTGTCGCA TCTGGGGTTG
GGGCTGGTTT ATTTGGAGCT GGACGATGAG TCGGCGGCCA TAAGCCATTT GGAAAAGAGC
ATGAACCTGT TACCGACCGA CCGGGGCGGG TATCTGCTGG CTATGGGGCA TGAAAAGCAG
GGCCGGATTG CAAAGGCTGC GGATCTGTAT CGGCAGATTG CCGAGGCTTA TCCGCAAAGC
AAAATCGGTC AGGCCGCGGC CCGAAAGGTG GCGGAGTTGC AGGCTAAGTG A
 
Protein sequence
MRVIHRLSVV AAALVLLMVG GCAVNPVTGR QELALFTITP SQEIQLGQEA FPKAVQQMGG 
EYDDPALAAY VNGVGKRVAQ VAERPELPYE FRVLNDSTPN AFALPGGFVA ITRGLLVSLE
NEAQLAAVLG HEVGHVTARD SVQGMQRGTL LGAGLAVLSA ATGSSAYGGV AQKAGQLAAG
LLDNRFSREQ ERQADRLGVD YMVRAGYNPR GSVQLQEFFY RTVEAGAEPM WLAGLFRTHP
FSKERMLALE AYIAERYSLQ QSDPRFVLNE QPFQRAVSGL RQSSKGYELY DQARQQEQQG
HVSQAIATYL QAATVAPDQA LILTGLGMAY LHARDVRAAR PHLARAVQLD GNYYLSHLGL
GLVYLELDDE SAAISHLEKS MNLLPTDRGG YLLAMGHEKQ GRIAKAADLY RQIAEAYPQS
KIGQAAARKV AELQAK