Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1212 |
Symbol | |
ID | 3723670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1419582 |
End bp | 1420892 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637750801 |
Product | Zn-dependent protease, putative |
Protein accession | YP_356631 |
Protein GI | 116878498 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000000000776404 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGTTA TTCATAGGCT GTCGGTTGTT GCTGCGGCCC TGGTCTTGTT GATGGTTGGA GGATGTGCCG TCAACCCGGT TACGGGGCGT CAGGAACTCG CTTTGTTCAC CATCACTCCT TCCCAGGAGA TTCAGCTGGG ACAGGAGGCT TTTCCCAAGG CTGTGCAACA GATGGGCGGC GAGTATGACG ATCCGGCCTT GGCCGCTTAT GTCAACGGGG TGGGGAAGCG TGTCGCCCAG GTGGCGGAAC GGCCTGAGTT GCCTTACGAG TTTCGGGTCC TCAACGATTC AACCCCCAAT GCCTTTGCTT TGCCGGGAGG CTTTGTGGCC ATCACCCGGG GGTTGTTGGT AAGCCTTGAA AACGAGGCGC AATTGGCGGC CGTACTGGGG CACGAAGTGG GGCATGTGAC GGCTCGCGAT TCGGTTCAGG GTATGCAGCG TGGCACCTTG CTCGGGGCCG GATTGGCGGT TTTATCCGCA GCTACCGGCT CCAGCGCTTA CGGTGGCGTG GCCCAGAAGG CCGGTCAGTT GGCTGCCGGC TTGCTGGATA ATCGCTTCAG TCGCGAACAG GAACGCCAGG CCGATCGTCT CGGTGTCGAT TATATGGTTC GGGCCGGTTA CAATCCGCGC GGCAGCGTGC AACTGCAGGA ATTCTTCTAT CGTACCGTCG AGGCGGGCGC CGAACCGATG TGGCTTGCGG GTTTGTTTCG CACGCACCCT TTTTCCAAAG AGCGTATGTT GGCTTTGGAA GCCTATATTG CCGAGCGCTA CAGTCTGCAG CAGAGCGACC CACGGTTTGT GTTGAACGAG CAGCCGTTTC AGCGGGCCGT AAGCGGTCTC AGGCAGTCGA GCAAAGGCTA CGAGCTTTAC GATCAGGCTC GGCAGCAGGA ACAGCAAGGC CATGTATCGC AGGCGATTGC CACCTATCTG CAAGCTGCCA CGGTGGCGCC GGATCAAGCC CTGATTCTGA CAGGTTTGGG GATGGCCTAT CTGCATGCCA GGGATGTTCG GGCCGCCCGT CCGCACCTGG CCCGGGCCGT CCAGTTGGAT GGCAATTACT ATTTGTCGCA TCTGGGGTTG GGGCTGGTTT ATTTGGAGCT GGACGATGAG TCGGCGGCCA TAAGCCATTT GGAAAAGAGC ATGAACCTGT TACCGACCGA CCGGGGCGGG TATCTGCTGG CTATGGGGCA TGAAAAGCAG GGCCGGATTG CAAAGGCTGC GGATCTGTAT CGGCAGATTG CCGAGGCTTA TCCGCAAAGC AAAATCGGTC AGGCCGCGGC CCGAAAGGTG GCGGAGTTGC AGGCTAAGTG A
|
Protein sequence | MRVIHRLSVV AAALVLLMVG GCAVNPVTGR QELALFTITP SQEIQLGQEA FPKAVQQMGG EYDDPALAAY VNGVGKRVAQ VAERPELPYE FRVLNDSTPN AFALPGGFVA ITRGLLVSLE NEAQLAAVLG HEVGHVTARD SVQGMQRGTL LGAGLAVLSA ATGSSAYGGV AQKAGQLAAG LLDNRFSREQ ERQADRLGVD YMVRAGYNPR GSVQLQEFFY RTVEAGAEPM WLAGLFRTHP FSKERMLALE AYIAERYSLQ QSDPRFVLNE QPFQRAVSGL RQSSKGYELY DQARQQEQQG HVSQAIATYL QAATVAPDQA LILTGLGMAY LHARDVRAAR PHLARAVQLD GNYYLSHLGL GLVYLELDDE SAAISHLEKS MNLLPTDRGG YLLAMGHEKQ GRIAKAADLY RQIAEAYPQS KIGQAAARKV AELQAK
|
| |