Gene Pcar_1211 details

Gene Information

• Locus tag: Pcar_1211
• Symbol: typA
• ID: 3723669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 1417485
• End bp: 1419293
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637750800
• Product: GTP-binding protein TypA
• Protein accession: YP_356630
• Protein GI: 77918815
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000000000229587
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCAGA ACATTCGCAA TATCGCCATT ATCGCCCATG TCGACCACGG TAAAACGACC 
CTGGTAGACG CCATGCTGAA ACAATCCGGC GTGTTCCGTG AAAACCAGGC TGTCGCCGAA 
CGGGTCATGG ACAACAACGA CCTGGAAAAA GAGCGTGGCA TCACTATCCT CTCGAAAAAC 
CTCTCCATCC ATCGCAACGG CCTGAAGATC AATGTCGTCG ATACGCCCGG CCATGCTGAC 
TTCGGCGGGG AGGTGGAACG TGTCCTCAAA ATGGTCGATT GCGTCCTCCT GCTGGTAGAC 
GCATTCGACG GCCCCATGCC GCAGACCCGT TTTGTTTTGA AAAAATCCCT TGATCTGGGC 
CTCAAGCCGA TTGTGGTGAT CAACAAGATC GATCGCCCCG GTTCACGGCC GGAACAGGTC 
GTCGACATGG TCTTCGATCT GTTCTGCGAA CTCAACGCCA ACGAGGACCA ACTCGACTTC 
CCGATTATTT ACACCAACGC CAAGGCCGGT ATAGCCAAAG CGGAACTCAA TGAGGAATCG 
GCCGACCTCG AGCCCCTGTT CAGCCTGATT CAGGACAAAG TCTCTCCCCC CAGCGGCAAC 
CCTGAAGCGC CCTTTCAAAT GCTGGTCACC AGCATCGGCT ACAACGACTA CCTCGGCCGC 
ATCGCTACCG GCAAAGTCGT CAACGGCGTG GTGCGCACAG GACAGACCAT CGCTCTGGTC 
AAACGGGACG GCAAAATCGA AAAAGGGCGC ATCAGCAAGC TGATCGGCTA TCAGGGCGTT 
GCCCAGGTCG AACTGGACGA CGCCCCGGCA GGCGATATCG TCAGTATCGC CGGATTCGAG 
GAAGTCGGTA TCGGCGAAAC CTTCGCCGAT GAAAGCTGTC CGGAGGCATT GCCCTCCATC 
GCCATCGACG AACCGACGTT GTCCATGAAC TTCTCTATCA ACACCTCGCC TTTTGCCGGA 
CGCGAAGGAA AATTCGTCAC ATCCCGCAAT CTGCGCGATC GCCTGATGCG TGAATTGCGC 
ACCAACGTCT CCTTGCGCGT CGAGGAAACG GACAACACCG ACACGTTTCG CGTATCGGGT 
CGCGGTGAAC TGCACCTGTC CATCCTGATT GAAAACATGC GCCGGGAAGG TTTCGAGCTT 
TCCGTATCCA AACCCGAGGT CATTTTCAGG GACATCGACG GAACGCGCTG CGAACCGATG 
GAAAACCTTA TCATCGACGT CCCCGAAGAA CACCAGGGAA CGGTCATCGA GAAACTCGGC 
AAACGAAAAG CCGAGATGCT TTCCATGAAC CCCATGGACG GTATCAACCG CCTCGAATTC 
ACCATCCCGG CTCGCGGCCT GATCGGTTTT CGTACGGAAT TCCTGACCGA TACCCGCGGC 
ACCGGCGTCA TGAACCATAC GTTCAACGAA TACGCCCCCT ACAAAGGGCC CATCGCCGGG 
CGCAGCAACG GCGTTCTCAT TGCCATGGAA GATGGCGAAA CGGCAGCTTA CGCCCTGTTC 
ACCCTGCAGG ATCGCGGCAC TTTGTTCGTC GACCCGGGCG TCAAGGTTTA CGAAGGTATG 
ATTATTGGCG AAAATGCCAA ACAAAGCGAC ATGGTGGTCA ACCCCTGCAA GGGTAAAAAG 
CTCACCAACG TACGTGCTTC CGGCAGCGAC GACGCCATCC GCCTGACTCC GCCGAGAGTC 
CTCAGCCTGG AGCAGGCACT GGAATACGTC AACGACGATG AACTCGTCGA AGTTACACCG 
ACGTCGATCC GGTTGCGCAA AAAACTCCTC GATGCCAATG CGCGAAAAAA ATATGATAAA 
AACAAGTAA 

 

Protein sequence

MQQNIRNIAI IAHVDHGKTT LVDAMLKQSG VFRENQAVAE RVMDNNDLEK ERGITILSKN 
LSIHRNGLKI NVVDTPGHAD FGGEVERVLK MVDCVLLLVD AFDGPMPQTR FVLKKSLDLG 
LKPIVVINKI DRPGSRPEQV VDMVFDLFCE LNANEDQLDF PIIYTNAKAG IAKAELNEES 
ADLEPLFSLI QDKVSPPSGN PEAPFQMLVT SIGYNDYLGR IATGKVVNGV VRTGQTIALV 
KRDGKIEKGR ISKLIGYQGV AQVELDDAPA GDIVSIAGFE EVGIGETFAD ESCPEALPSI 
AIDEPTLSMN FSINTSPFAG REGKFVTSRN LRDRLMRELR TNVSLRVEET DNTDTFRVSG 
RGELHLSILI ENMRREGFEL SVSKPEVIFR DIDGTRCEPM ENLIIDVPEE HQGTVIEKLG 
KRKAEMLSMN PMDGINRLEF TIPARGLIGF RTEFLTDTRG TGVMNHTFNE YAPYKGPIAG 
RSNGVLIAME DGETAAYALF TLQDRGTLFV DPGVKVYEGM IIGENAKQSD MVVNPCKGKK 
LTNVRASGSD DAIRLTPPRV LSLEQALEYV NDDELVEVTP TSIRLRKKLL DANARKKYDK 
NK