Gene Pcar_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1208 
Symbol 
ID3723666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1414374 
End bp1415786 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content53% 
IMG OID637750797 
Producttwo component signal transduction response regulator 
Protein accessionYP_356627 
Protein GI77918812 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0354694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTATT CTTTGCGTAG CGTTCTTCTT GTCCATAAAG ATCCCAAAGA AAGAAGTGAG 
CTTGCCGTAG CTATTCGCAG AACAGTCGAC TGCACAGTGC TCGAATCCGA CTCCCCCGCA
GAGGCCCTTA AGTTATTGCA GGATGATGAA GTGTCCGTGA TCCTTACGGA TCTCTTCGCG
CCGAGCAACG AGGGTCTGGA ACTGCTGAAG AAAGCTTCGC AGCACAACTC TCAAATCGTC
ACCATCGTCG GGGTCCCTGT CGACCATCGC GGCATGGCTC TGGAATCACT CAGACGCGGG
GCGTTTTTCT GCCTCAACAC GCCTTACAAT CACGAAGAAA CCATCATTGC CACCTCTCGT
GCCTTACAGC ATCATGACCT TCTCACCAAG GGAGAAATAA AAGCACGCAA ATTCCGGAAA
TCCGACGGCT TTCACGGTAT CATCGGGCAG GCTCCGAAAA TGCGGCAACT CTTCAACAAC
ATAGAAAAAC TCGCGGCCGA GGGCGATTCA TCCGTACTGG TACTCGGCGA AAGCGGTACC
GGTAAAGAAC TGGTGGCCCG CGCCATTCAC GCGCACGGTC CGCGCAGTCG CAAAAATTTC
GTGCCGGTCA ACTGCGCCGC CATCCCCGAG GATCTTCTGG AAAGCGAACT GTTCGGCTAT
GTCAAGGGAG CCTTTACCGG TGCCACACAA GCGAAAATGG GCCGGCTTCA ATATGCTGAA
GGCGGCACCC TTTTTCTGGA CGAGATCGGC GATATGAAAG CAAGCCTGCA GGCCAAACTT
TTACGGGTGC TGCAGGAGAA GGAATTTGAA CCGGTCGGTG GGGTAAAACC GGTATCTGTG
GATGTGCGTA TCGTTGCCGC GACCCACCGG GATCTGGAAA AGTCCGTGGC CGAGGGACGC
TTTCGCGAGG ACCTCTATTA CCGCCTGAAT GTCATTCCGC TGCAGATCCC CCCTTTGCGC
AAGCGCAAAG AAGACATTTC TCTGCTGATA GAACGATTTG TCGGTATCTA CAACCGCAAG
AAAAAGAACC CTTTCAAAGG ATTCAGCGAC GATGCCCTGC AGGCATTGAA GCAATACCCC
TGGCCCGGCA ACGTGCGGGA ACTCGAAAAC CTGGTACAGC GTATGTCCAT ATTTTTTGCC
GGCCAATCCG TCAGCCGCAA AGACCTGCCG GAAAAATACC AGGGGTGCGA CGAAGCACAG
CAACAACCGG TACAAGAACA GGAAAATTCC ATCAGCCTCG AAGACGGCGG CGTCGATTTC
AACCTGCTCG TCAATCGTTT TGAAAACCAG CTGATACTGC AGGCCTTGAA TGTCACCGGA
GGCAACAAAC GCGAAGCGGC CAAGCTGCTC AACCTGAAAC GCACCACCTT GATCGAAAAA
CTCAAACGAA AAAATATTCT GACCGACAAC TGA
 
Protein sequence
MFYSLRSVLL VHKDPKERSE LAVAIRRTVD CTVLESDSPA EALKLLQDDE VSVILTDLFA 
PSNEGLELLK KASQHNSQIV TIVGVPVDHR GMALESLRRG AFFCLNTPYN HEETIIATSR
ALQHHDLLTK GEIKARKFRK SDGFHGIIGQ APKMRQLFNN IEKLAAEGDS SVLVLGESGT
GKELVARAIH AHGPRSRKNF VPVNCAAIPE DLLESELFGY VKGAFTGATQ AKMGRLQYAE
GGTLFLDEIG DMKASLQAKL LRVLQEKEFE PVGGVKPVSV DVRIVAATHR DLEKSVAEGR
FREDLYYRLN VIPLQIPPLR KRKEDISLLI ERFVGIYNRK KKNPFKGFSD DALQALKQYP
WPGNVRELEN LVQRMSIFFA GQSVSRKDLP EKYQGCDEAQ QQPVQEQENS ISLEDGGVDF
NLLVNRFENQ LILQALNVTG GNKREAAKLL NLKRTTLIEK LKRKNILTDN