| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1192 |
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| Symbol | fliF |
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| ID | 3723689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1398811 |
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| End bp | 1400370 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637750781 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_356611 |
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| Protein GI | 77918796 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAG AAACCTCGCC GAAAAATTTG ATCGAAACCA TTCGCCAGTG GCCTCGTAAG
CGGCAGCTGA GTCTTCTGGC TGTCGTTTTG GCCTGTGTGG TTTTCTTTGC CGCCATTATA
TTTCAGGCCA ACAAAGCCGA TTATCAAATG CTCTTCGGCA ATCTGGACAG TGCCGATGCG
GCGGCGGTGG TGGATCGCCT CAAAGAGCAA AAGGTACCCT ACCGACTTGA ACACGGCGGC
CGTGCCATTT TCATCCCGGC CGACAAGGTG TATGAAATTC GCCTTGCCAT GGCAGGCAGC
GGCCTGCCCC GCGGCGGCGG CGTCGGTTTC GAGATTTTTG ACAAGCAAAG TTTCGGCATG
ACCGACTTTG CGCAAAAGAT CAATTATTTG CGGGCTCTCC AGGGCGAGCT GTCGCGGACC
ATCGCCTCCC TGGCCCCGGT GGAAGCCGCC CGCGTTCATC TAGCTTTGCC GGAGAAGCGT
TTATTCCGCG ATCAGCAGCA AAAAGCCAGC GCCTCGGTAA TCGTCAAACT GGCAACCGGG
CAAAGTCTTC GTGAAACCCA GATCCTCGGC ATCGTGAATC TGGTAGCCGG CAGCGTCGAC
GGACTCGATG TGGACCAAGT CGCGGTTATC GATGACAACG GCCGGGTTTT GTCCCAGACC
GCCGACCACT CCGGCACTGG CGGCACGGCA CCGGACATGC TGGAATACCA GCAAAACCTC
GAGCAGCGCC TTGAGTTGCG GGCACAGGCA TTGCTGGATC GCGCCTTGGG CATGGGCAAC
TCCATGGTCC AGGTCACGGC GGCCATCGAC TATACCCAGC GTGAGCGCAT GGAGGAAAGC
TACGACCCCA ACCAAACGGC CGTGCGCAGC GAACAGTCCT CCAGCGAAAA AGGCGGTGTC
GCCAATGCGG GCGGGGTTCC CGGCGTGCAG ACCAACATCA AAAACGAAAA AGCCGGCAAC
TCCTTTATTC CCACCAGCCG CAGCAACGAA ACCATCAATT ACGAAATAAG CAAAGTGGTC
AGCAAACAGG TCGACTCGGT GGGCTCCATC AAGAACCTTT CGGTGGCAGT GCTGGTTGCC
GATCGTCCGG TCGACAATCA AGGCGATACC GACAAGGCTC CATCCTATCA ACCGCGCGAC
CCCAAAGAAC TTGCCGCCAT TGAAAAGATG ATCAGCCGCG CCCTGGGCCT CAACCCGGAC
CGCGGCGATC AGATCGCTGT CATATCGAGA CCCTTTGAAA CGGCTTTCAA CAGCGAACCG
CTGGTAAAAT CATCGCCCTG GAGCCGTATA TACCAAATGG TTCCGATGAT CAAATATGCC
TTGCTGGCAC TGACCGCAGG GTTGTTTTAC TTCTTTGTGA TCCGGCCGCT GTTGCAGATT
TTACGTGGCG ACGGCCCCAT GGTCGAACAT TACAAAACCG TGGAACAACT CGAATCCGAG
ATGGCCGGAT TACCTGACGG CAGCGCGGCT CAGGAGCCCC CTCTCAGCCT GCCCAGTGGC
CAGCCGTCAG AGCAGAAGGA TCCGGCTCAG ATTATCAAGG CCTGGCTCAA AGATAATTGA
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| Protein sequence | MAEETSPKNL IETIRQWPRK RQLSLLAVVL ACVVFFAAII FQANKADYQM LFGNLDSADA
AAVVDRLKEQ KVPYRLEHGG RAIFIPADKV YEIRLAMAGS GLPRGGGVGF EIFDKQSFGM
TDFAQKINYL RALQGELSRT IASLAPVEAA RVHLALPEKR LFRDQQQKAS ASVIVKLATG
QSLRETQILG IVNLVAGSVD GLDVDQVAVI DDNGRVLSQT ADHSGTGGTA PDMLEYQQNL
EQRLELRAQA LLDRALGMGN SMVQVTAAID YTQRERMEES YDPNQTAVRS EQSSSEKGGV
ANAGGVPGVQ TNIKNEKAGN SFIPTSRSNE TINYEISKVV SKQVDSVGSI KNLSVAVLVA
DRPVDNQGDT DKAPSYQPRD PKELAAIEKM ISRALGLNPD RGDQIAVISR PFETAFNSEP
LVKSSPWSRI YQMVPMIKYA LLALTAGLFY FFVIRPLLQI LRGDGPMVEH YKTVEQLESE
MAGLPDGSAA QEPPLSLPSG QPSEQKDPAQ IIKAWLKDN
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