Gene Pcar_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1186 
Symbol 
ID3723683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1392876 
End bp1394618 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content57% 
IMG OID637750775 
Productputative flagellar hook-length control protein 
Protein accessionYP_356605 
Protein GI77918790 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATGC TATCCTCAAT CCTGCCTGAA ACCGCCGTCG CTCCGGGTAT CGCACAAAAG 
ACCTCGAGAC CGGCAACCAA AGGTGCTTTT CAAAAGGTCC TGAAACAGGA ATCCGGCAGC
AACAACATGT CGGAGGATCT GCCTGTTTCA CATGCAAAAG CCACGACAAA CACGCAAAAC
ACCGCCAATC TCCCGAATTC CGGAACACAA CAGTCTTCGA CTGGGGAAAA AAGTCCCGTC
GAGGTAAAAC CGGACGGCCC GACCGACCGG GAAATCGTGT CGGCACGGAC ATCGGAATCG
GCGTTGGAAG ACCTGCAACC TTCGGACGAA GGCACCGAGC CGATAGCGGA ATCCTTGATG
GCCGGTACGA TCCTGCATGC ACCCATGGTG CAGATCCCCA CGCAAAACAC CACGAGCCCG
ACGGCAACCG GTTCCGTTAT GGAAAAATCT GAAACAACGG TGGCTGTTGC GCAGACAAAC
CAGGCAATCC CCGTGATTCA GGAAACGCAG ACGGCTACCG CGAGCATCGG CAAGCAACAA
CCGATCGCGC CCCAGCAAAA CAATGCTCCG GGCAATGAGA TCTCCGGGGA TGTTGCGCAG
CAGACAAGCC CTTCGGAGGA ATCCGTGAAC GGCCGCTCTG CCCTGTCACA CATCGCCGAT
ACGACACACC AGCAAACCGG CAGCAACCAA CAAACCGCCC CATCGCCCGA CCTCGAGGCA
TCTCCGGCTA CGGCTGCACA AACCCTGTCG CAGGTCACCG CTGATCGAAT CGTACAGGTG
GCACCATCCG TTTCCGGGCA GGCCACGAAT AAACCGGTAG CGAACAAAGC CAAGGCACAA
CCGCTTGGCG AAAGCCGCTT TTCGGATCTG CTTGGTCAGA ACCAAACGAG CAACTCCGAT
ATGGTGTCGG CAGAACAGCC AACCGCCTCT GCCACCCAGG CGCCGGTTTC GGAACCGAAC
CTGGTGACGG CACCGGCAGC GCGCAATACG GCAAGCCTGC CAAACAATGC CGCGGATAAA
GGAAACAAAG GTACAGAGAC GACTGAGACG GTTTTGGAAA TCAAGGACCA AACGGTCTCA
AATCCATCGA CCGTCATTGC CGGCACGGAA AATAGTCAAC CCGCCATCAC CGGGGATCCC
GGCCAGACAA CCACGATCAT CGAGGTCACC CCGGGCACGA CGGAATCGGC ACCCGGCATG
ATACAGGGCA CCGAGCAGAC CGCTGTTGCC GGCAATTCGC CTTTGTCTTC GCCCATGTCC
ACAGCGTCTG CAGCTACCAC CGACGCCCTG CCATCCGGTA ACGGCTTTGC CATACCGGAA
CAACAGGTCA TGGAGCAGGT CATTCAGCGA TCGTCCCTGA AAGAACTGGA GGGCAAAAGG
CAACTCACGG TGGAACTGCA TCCGGAGGAA CTGGGACAGG TGAAACTCAA TCTGACGCAG
GACAACGACC GTATGCAACT GCACCTGCAG GCCCATAGCA GCGAGGTACG CGACATCTTG
GAAAAACATC TGCCACGCCT CCAGGAAGCC TTGCAACAGC AGGGTCTGCG CCTGGAAACC
ATCCAGGTGA GCGTCGACGC GCAACGCAAC AACACGCAGG AATTCTTGGA TCGTCAACAG
CAGCAAGCCC ATCGCAACCC GTGGCAACAG AACCATCGCG CTGCCGTACA GACCGAAGAA
CAACTCATTG CCAAACCGAC AAATCGGGCA AATTCCGCCA CTGGCCTCAG TTTGAGGATT
TAA
 
Protein sequence
MQMLSSILPE TAVAPGIAQK TSRPATKGAF QKVLKQESGS NNMSEDLPVS HAKATTNTQN 
TANLPNSGTQ QSSTGEKSPV EVKPDGPTDR EIVSARTSES ALEDLQPSDE GTEPIAESLM
AGTILHAPMV QIPTQNTTSP TATGSVMEKS ETTVAVAQTN QAIPVIQETQ TATASIGKQQ
PIAPQQNNAP GNEISGDVAQ QTSPSEESVN GRSALSHIAD TTHQQTGSNQ QTAPSPDLEA
SPATAAQTLS QVTADRIVQV APSVSGQATN KPVANKAKAQ PLGESRFSDL LGQNQTSNSD
MVSAEQPTAS ATQAPVSEPN LVTAPAARNT ASLPNNAADK GNKGTETTET VLEIKDQTVS
NPSTVIAGTE NSQPAITGDP GQTTTIIEVT PGTTESAPGM IQGTEQTAVA GNSPLSSPMS
TASAATTDAL PSGNGFAIPE QQVMEQVIQR SSLKELEGKR QLTVELHPEE LGQVKLNLTQ
DNDRMQLHLQ AHSSEVRDIL EKHLPRLQEA LQQQGLRLET IQVSVDAQRN NTQEFLDRQQ
QQAHRNPWQQ NHRAAVQTEE QLIAKPTNRA NSATGLSLRI