Gene Pcar_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1170 
Symbol 
ID3723706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1364912 
End bp1365415 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content54% 
IMG OID637750760 
Productflagellar basal body-associated protein 
Protein accessionYP_356589 
Protein GI77918774 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones92 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA AAGACCTTCA GCAAGACGGT TCGGCCAAAA AAGGTAACAA GAACCTGATC 
ATCATCGGCA TTCTCGGCGT ACTGCTGCTG GGTGCCATCG GAGTTGCCGC CTATATGATG
GGCAAGGCCA ATGCCCCGGC GGCTGAACAG GAAGAACAAA CCGCCGGAGA CACGGCTCCC
GCCAACGGCA CCAAGGTACT CAGCGGACTG ATGGTGGAGG TCGAACCCTT CATCGTCAAC
ATCCTCGATG TCCAGGGCAC CCGTTACCTG AAGGCATCCA TTACCCTCGA AGTCGACAGC
GAACTGGCCA TCCAGGAAGC CACCGAGCGT ATGCCGCAGA TTCGTGATGC GGTACTGCTG
CTGATCAGCA ACAAGACTTT TTCCGAGATG TCCGATCTGC AGGGGAAATT ACAGCTGCGA
GCGGAATTGA TGGCCAAAAT CAACAGTTTT TTCCGACGCG GCAAGGTCCA GAAAATTTAT
TTTACCGAGT TCGTGGTTCA ATAA
 
Protein sequence
MAEKDLQQDG SAKKGNKNLI IIGILGVLLL GAIGVAAYMM GKANAPAAEQ EEQTAGDTAP 
ANGTKVLSGL MVEVEPFIVN ILDVQGTRYL KASITLEVDS ELAIQEATER MPQIRDAVLL
LISNKTFSEM SDLQGKLQLR AELMAKINSF FRRGKVQKIY FTEFVVQ