Gene Pcar_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1169 
SymbolfliM 
ID3723705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1363906 
End bp1364901 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content56% 
IMG OID637750759 
Productflagellar biosynthesis protein, component of motor switch 
Protein accessionYP_356588 
Protein GI77918773 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones84 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACGTA TTCTTTCCAA AGAGGAGATC GCCGAGTTGC TCTCGGCCGT GCATGACGGA 
GAAATCCCTC TGCGCGATGA AGAGCCGGAG CCGCCGGCCG AGGTCAAACG GGAAATCTCC
AGTTTGAACC TGGTGGCGCT GCAAGGTCCG CGTCACTGTA AAATCGAAAA CTTCGATCTG
GTCCTCGATA CCCTGGCCCG CCACCTGGGC ATCTCCCTGA CCAATCGCAT GCAACGCAGC
ATCGGTGTGC GCCGGAGCAT CATGCAGGTG TATGAATACG ACACCTTTTT ACAGCAACTG
GCAGGAAGGG ATGCGCTGGG CGTCATTCGT CTCGATCCGC TGCGCTGGCG CGGCGTCTTC
ATCTTCAAGG AAAAACTGGC CTTTTATCTG CTGGAACACC TGCTCGGCGG GGCACCTGAC
GTGAACCTGA ATTTGCCGGG CAGATCCCTC ACAGCCATCG AAACAAGCGT TTTGCGCAAC
ACCATTGCGG ATGCCTGCCT CGATTTGAAC AAGACCTTCG CCCCTCTGGA AAAAATCGAG
AGCTCGCTGG TGAAAATCGA AAGTTCGACA CGCCTGATCA ACATTGTGCC GGGCGATGCA
TCCGTGCTGG CGGCGCACTT CGTCGTTACC GGCAATAACC TTGAAGACGA AATCGTCCTG
GTCCTGCCCA TGGCGATGCT CGACCCTCTC AAGGAAAAAA TGCGCGAAGG GAGCGCGGTC
TTTTCGGAAA GCCAGGACCG CCCCTGGCAA ACCCAACTGG AACAGGAAAT CGAGCAGATG
GATGTCGACC TGTCGGCTCA AATGGCGACC CTGAATCTGA CCGTAAGGGA CATTCTAAAC
TTTAAAGTGG GTGATATTCT CGATCTGGGA TGCGCCCCAT CCAGTCCCTT GCAGGTCAGA
GCTGCCGGGC AACCGAAATT TCAGGCCATA GCCGGTACTC ATCAAGGGAA AAAGGCCGTG
CGTATCTCAG GCCGCATCAA CCGAAATAAT CTTTAG
 
Protein sequence
MERILSKEEI AELLSAVHDG EIPLRDEEPE PPAEVKREIS SLNLVALQGP RHCKIENFDL 
VLDTLARHLG ISLTNRMQRS IGVRRSIMQV YEYDTFLQQL AGRDALGVIR LDPLRWRGVF
IFKEKLAFYL LEHLLGGAPD VNLNLPGRSL TAIETSVLRN TIADACLDLN KTFAPLEKIE
SSLVKIESST RLINIVPGDA SVLAAHFVVT GNNLEDEIVL VLPMAMLDPL KEKMREGSAV
FSESQDRPWQ TQLEQEIEQM DVDLSAQMAT LNLTVRDILN FKVGDILDLG CAPSSPLQVR
AAGQPKFQAI AGTHQGKKAV RISGRINRNN L