| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1131 |
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| Symbol | ddhB |
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| ID | 3723745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1328982 |
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| End bp | 1330085 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637750721 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_356550 |
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| Protein GI | 77918735 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 85 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGGTT TTTGGTGCAA TAAATCGGTA TTCGTGACCG GGCATACGGG ATTCAAGGGG
TCCTGGCTCT CGCTCTGGCT GCAGCGATTG GAGGCGAAGG TCCACGGCTA CGCCCTGGAG
CCTCCGACCA CCCCCAGCCT GTTTGAAACG GCCCGTGTAA AGGAAGGGAT GCAATCCGTC
CTGGGTGACA TCCGCCATCT GTCGGATCTT CAACAGGCCA TGCAAAAGGC CCGGCCTGAA
ATCGCATTTC ACCTTGCGGC ACAACCCTTG GTCCGTGCCT CCTACAGCAC CCCCGCCGAA
ACCTTTGCCA CCAACGTCAT GGGGACGGTT CATTTTCTCG AAGCCGTCCG ACATACGCCG
TCGGTCCGGG TTGCCATCGT CGTTACCAGC GACAAGTGTT ACGACAACCC CGAAACCCAA
AGGGGTTTCC GCGAAACGGA CCCGATGGGA GGCAAGGACC CCTACTCCGG CAGCAAAGGC
TGTGCGGAAC TGGCGACCGC CTCGTACCGC TCGTCGTTTT TCAACAACGA CCGGGTTGCG
ATTGCCACCG TCCGGGCCGG AAACGTGATC GGCGGAGGCG ATTGGGCCGC GGATCGGTTG
ATTCCCGATC TGGTCAGAGC GTTTACCCAA AACCGTCCTT TAGCTCTGCG TTTTCCGCAG
GCGGTTCGTC CGTGGCAACA TGTGCTGGAA CCTTTACGTG GCTACCTGAA GCTTGCCGAA
CGCCTGTGGC ATAAACCGGA CGGTCTCGAC AGGGGATGGA ATTTCGGTCC GCGGTGTGAA
GATGCCCGCC CCGTAGTCGA TGTGGTTCGC ACGGCGGCCC GTATCTGGGG AGATGGCGCA
CGTTGGACCG CCGACTCGGC TGCCTCTCCC GCCGAATCCC GCTACCTGTA TCTCGACTGT
TCCGGGGCCA GGGATCACCT GCACTGGACA CCATCCATAT CCCTGGATCG GGCTCTCGCC
TGGACCCTTG ATTGGTACCG CTGCCACGCG GAAGGCACAA TCGATATGCG AGCCTTTACC
GAAGATCAGA TCACCTCGTA CGAAGCCTTG GCCGTATCCG GCCCGGGATG TGATACATAC
GGAATGGGAG CCTGTTGTGC CTGA
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| Protein sequence | MPGFWCNKSV FVTGHTGFKG SWLSLWLQRL EAKVHGYALE PPTTPSLFET ARVKEGMQSV
LGDIRHLSDL QQAMQKARPE IAFHLAAQPL VRASYSTPAE TFATNVMGTV HFLEAVRHTP
SVRVAIVVTS DKCYDNPETQ RGFRETDPMG GKDPYSGSKG CAELATASYR SSFFNNDRVA
IATVRAGNVI GGGDWAADRL IPDLVRAFTQ NRPLALRFPQ AVRPWQHVLE PLRGYLKLAE
RLWHKPDGLD RGWNFGPRCE DARPVVDVVR TAARIWGDGA RWTADSAASP AESRYLYLDC
SGARDHLHWT PSISLDRALA WTLDWYRCHA EGTIDMRAFT EDQITSYEAL AVSGPGCDTY
GMGACCA
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