| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1130 |
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| Symbol | ddhC |
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| ID | 3723744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1327634 |
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| End bp | 1328989 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637750720 |
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| Product | CDP-4-keto-6-deoxy-D-glucose-3-dehydratase |
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| Protein accession | YP_356549 |
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| Protein GI | 77918734 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 76 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGATA AACGAGAGCA GCAATTGCGA CAGAAAGCCA TTGAAGCGGC TATCGACTAT
TGCCGACATG TCCACACTGC GCCAAAAAAA CCGTTTGCCC CCGGGGACCG CATTCCTTAC
GGTGGTCGCA TTTTCGACGA ACAGGACATG GCCCATCTGG TCGATGCCTC CCTCGATTTC
TGGCTGACCG CCGGCCGTTA TGCCGACCGT TTTGAGGCGG CATTGGCCGA TTTTCTGGGC
GTTGACTATT GCTCCCTGAC GAATTCGGGA TCTTCGGCGA ACCTGCTGGC CTTCATGGCC
CTGACTTCTC CGACTCTGGG AGAACGGAGG ATCAAACCCG GCGATGAAGT TATCACCGTA
GCCGCCGGAT TCCCCACCAC GGTCACACCC ATCCTTCAAT ACGGTGCCGT CCCCGTCTTC
GTCGACGTTT CCCTGCCGAC GTACAATATC GACGTCACCC GGTTGGATGC TGCCCTCTCC
GGCCGAACCA GGGCCGTCAT GGTGGCCCAT ACCCTGGGCA ACCCCTTTGA TCTTCAGGCC
GTAAAAGCCT TCTGCGAAAA TAACGATTTG TGGCTGATCG AAGACAATTG CGACGCCCTG
GGATCCCGTT ACCGGATCGG CGACACCTGG CATTATACCG GCACCGTCGG CCACTTAGGC
ACATCCAGCT TTTACCCGCC GCACCACATG ACCACCGGTG AAGGTGGCGC GGTCTACACC
AACGATCTGC GGTTAAAAAA GCTGGTCAAT TCCTTCCGCG ACTGGGGCCG CGACTGCTGG
TGCGCCTCCG GGCATGACAA TTCCTGCGAA AAGCGCTTTT CCCGGCAGTT CGGCGAACTT
CCCTACGGAT ACGACCACAA GTATGTTTAT TCGCATTTTG GGTACAACCT GAAACTTACG
GACATGCAGG CAGCCATAGG CTGTTCCCAG TTGGAGAAGT TGCCTTCCTT CATCGTTGCG
CGAAAGAACA ATTGGCGCAC CCTGAAAGCC GGGCTTGTCG CCATGCAGAA ATGGTTTATC
CTGCCCGAAA CCACACAAAA TTCGGATCCC GCCTGGTTCG GATTCCCCAT CACGGTTAAA
TCCGGAGCCC CTTTTACAAG GGATCAAATC GTCGCAAAGC TCGAAGAAAA CGGTATTCAA
ACCCGCATGC TGTTCGCCGG GAACCTGGTC AAACATCCCT GTTTTGACGA CATGCGCCGT
TCCGGTTCCG GATTCCGCAT CATCGGGGAT CTCGCTGTTA CCGACCAAAT CATGCATGAC
ACGTTCTGGC TCGGTGTCTA CCCCGGGCTC GACGACCGGA TGCTCGGGCA TATGATCCAT
GTCATCCAGA AATCCGGGGA ATCCCTATGC AAGTAA
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| Protein sequence | MPDKREQQLR QKAIEAAIDY CRHVHTAPKK PFAPGDRIPY GGRIFDEQDM AHLVDASLDF
WLTAGRYADR FEAALADFLG VDYCSLTNSG SSANLLAFMA LTSPTLGERR IKPGDEVITV
AAGFPTTVTP ILQYGAVPVF VDVSLPTYNI DVTRLDAALS GRTRAVMVAH TLGNPFDLQA
VKAFCENNDL WLIEDNCDAL GSRYRIGDTW HYTGTVGHLG TSSFYPPHHM TTGEGGAVYT
NDLRLKKLVN SFRDWGRDCW CASGHDNSCE KRFSRQFGEL PYGYDHKYVY SHFGYNLKLT
DMQAAIGCSQ LEKLPSFIVA RKNNWRTLKA GLVAMQKWFI LPETTQNSDP AWFGFPITVK
SGAPFTRDQI VAKLEENGIQ TRMLFAGNLV KHPCFDDMRR SGSGFRIIGD LAVTDQIMHD
TFWLGVYPGL DDRMLGHMIH VIQKSGESLC K
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