Gene Pcar_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1129 
Symbol 
ID3723743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp1327098 
End bp1327643 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content57% 
IMG OID637750719 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_356548 
Protein GI77918733 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAA CCGTCAGAGA AACGCCGCTC AAAGGCTGCT ACGAAATCCT GCCGGCGGTC 
CTGGGCGATG AACGCGGCTC CTTTATCAAA ACATTTCATG CCCCCGCCTT TTCCCGGCAC 
GGCCTCTGCA CGGATTGGCG GGAAGAATAT TTTTCCGTAT CGCAACAGGG CGTACTGCGG 
GGATTGCATT TTCAAACCCC GCCCCATGAT CACGCCAAGC TGGTCTACTG TGTCGGGGGT 
GCGGTGCTGG ATGCGGTCGT CGATTTGCGC AGGGAATCGC CCGACTACGG CCAACATGCG 
ACCATTGAAC TGAATCCGGA CAAGGCCAAC ATGCTGTACA TCCCGGCAGG CATGGCACAC 
GGGTTTTATG TCCTCCGCGG CCCGGCGACC ATGATGTATA AAGTTTCGAC GGTTTACAGC 
CCCGGACACG ACAGGGGCAT CCTCTGGAAC TCCGCCGGCA TACCATGGCC CGACGACAAT 
CCGCTCATCT CCCCCAGAGA CGCCGCATTT GAGGCTTTTT GCGATTTTGA ATCACCTTTT 
TCCTGA
 
Protein sequence
MQVTVRETPL KGCYEILPAV LGDERGSFIK TFHAPAFSRH GLCTDWREEY FSVSQQGVLR 
GLHFQTPPHD HAKLVYCVGG AVLDAVVDLR RESPDYGQHA TIELNPDKAN MLYIPAGMAH 
GFYVLRGPAT MMYKVSTVYS PGHDRGILWN SAGIPWPDDN PLISPRDAAF EAFCDFESPF 
S