| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1122 |
|---|
| Symbol | |
|---|
| ID | 3722834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1318611 |
|---|
| End bp | 1319705 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637750712 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_356541 |
|---|
| Protein GI | 77918726 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 70 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACACA AAAAAAACAC CCCATTGGTT ACCATTGCCA TACCTAACTA CAACATGGGG
AAATATATTG GTGGGGCTAT TGAAAGTGCA CTATCACAAA CCTTTACCGA TTTTGAATTA
CTTATTGTAA ACAACGTTTC AACCGATAAT TCCTGGGACA TTATCAAACA CTATAAAAAA
ATGGATAGCA GGATTGTTGC CGTAAACCTG GATAGACATA TACCTCTGCC GATAAAAAAC
TGGAATAAAT GCCTCGATAT TGCCCGTGGC AAATATATAG TATTTTTACA TGCAGACGAC
ATACTAAAAC CGGATTTTTT AAAACTAAAC CTTGAAGTTT TCGATTCAAA TCCGGACTTA
GGTTATGTCT TCGCCGAAAA GGAGTATATC GACGACCAAG GCAACGTCTA TCCCAGCCAT
GTTTTTTATA AAGACAGTGG AATCATACCC GGCATGGAAG AAGCCAGGGT CAATCTCCTG
GGTTGGCACA CCGCACCCGT CCAAATGTTG ATCAGGACGG AATGCATGCG CGAGGTCGGA
GGATATGAGT TTTCCGATTG TCTCCCGGTC CTCTTACTCA ATTTCGGTTG GGATGTCGGA
TACAGAAAAG AAATACTGGT TCAATACAGG AGGCACGAAG CTTCAGCCTC ATCGATCAGC
ATCAAGGATA AAACCTTGAT CCAGGTGCTG TATCTGACCA AAATGATGGC CTTGAACCTG
TTCCTCCCCC CCGGGACAGA ACGGCTCGAG GAACTTAAAC CGGAAATCAA GAAAAACACG
GCCATGGCCT GCCTCAAGGC TTATTGCATG GACGTGTTGG GTCGCAACGA AAACAGTCTG
TGTCGCGAAT ACATGCACCT CGCCCGGGGC TTCTGGGAGG GAGTCTGCGA CAACCCTCTC
TATCAATTCC TCGAAAAAGC TTGCCTGAAA TGCGACTGGA CGCCGGAGGC CTTGAATAAA
GCATGGTCCG CCATCGCCCC CCCCACGCCG GGAACAGCAC CCCCGTATCC GCTTCCGGAG
GGATCGCGGC CCTTTACGGC AAAAAACATC TCCCGACAGG CACCGGTCGA TGCTATCATT
CCGCCGATGC CATAA
|
|---|
| Protein sequence | MLHKKNTPLV TIAIPNYNMG KYIGGAIESA LSQTFTDFEL LIVNNVSTDN SWDIIKHYKK
MDSRIVAVNL DRHIPLPIKN WNKCLDIARG KYIVFLHADD ILKPDFLKLN LEVFDSNPDL
GYVFAEKEYI DDQGNVYPSH VFYKDSGIIP GMEEARVNLL GWHTAPVQML IRTECMREVG
GYEFSDCLPV LLLNFGWDVG YRKEILVQYR RHEASASSIS IKDKTLIQVL YLTKMMALNL
FLPPGTERLE ELKPEIKKNT AMACLKAYCM DVLGRNENSL CREYMHLARG FWEGVCDNPL
YQFLEKACLK CDWTPEALNK AWSAIAPPTP GTAPPYPLPE GSRPFTAKNI SRQAPVDAII
PPMP
|
|---|
| |