Gene Pcar_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1120 
Symbol 
ID3722832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1316051 
End bp1316800 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID637750710 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_356539 
Protein GI77918724 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACA AAACGCCATC CGATCGGATC GTTTTCGTAA CCGGGGCCAG CCGCGGTATC 
GGCAAAGCGA TTGCCCGCCG CTTTTTGCGC GACGGTTACC CCGTTGCAGC ATGTTACTGT
TCCCACCCGG AAGGGGCGCA CGAACTGGCG GCTGAATTCC CCGCGGCTCT GCCCGTGCAG
GTCGACACCG GGGACCGGCA ATCGATCCGC CGGGCATTGT ACAACTGTAC GGGGCATTTC
GGTGGCCCGG TGGCGATCCT GGTCAACAAC GGCGCCATCG CTCAGGAAAA ACCCTTTTTG
GACCTGATGG ACGAAGACTG GGATCGCATG CTGGGCATCA ATCTGCGCGG TCCTTTCGCC
CTGGCCCAGG AGGTCCTGCC GGATATGCTC GACGCCGGCT GGGGCCGGAT CATCAACCTG
GTCTCCATCG GGGGGCAATG GGGCGGCATG AACCAGGTCC ACTACGCCGT GGCCAAGGCC
GGTTTAATCA ATCTCACCCG CTCGCTGGCC AAATTGTATT CCCGCAAAGG GATTACCAGC
AATGCCGTGT CTCCCGGCCT GGTAGCCACC GACATGACGG CTGCCGAACT CGCTTCGGAA
GCAGGTCGGG ACAAGGTCGA CAGCATCCCC TCGGGACGCC TCGGCACCAC CGGAGAAATC
GCCGCCGCCG TAAGCTGGCT GGCTTCCGAT GAAGCGGCCT ACGTTACGGG CCAGACACTC
AACCTAAACG GGGGAATGTA TTTTGACTGA
 
Protein sequence
MTNKTPSDRI VFVTGASRGI GKAIARRFLR DGYPVAACYC SHPEGAHELA AEFPAALPVQ 
VDTGDRQSIR RALYNCTGHF GGPVAILVNN GAIAQEKPFL DLMDEDWDRM LGINLRGPFA
LAQEVLPDML DAGWGRIINL VSIGGQWGGM NQVHYAVAKA GLINLTRSLA KLYSRKGITS
NAVSPGLVAT DMTAAELASE AGRDKVDSIP SGRLGTTGEI AAAVSWLASD EAAYVTGQTL
NLNGGMYFD