| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1099 |
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| Symbol | |
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| ID | 3723884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1291722 |
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| End bp | 1292927 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637750689 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_356518 |
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| Protein GI | 77918703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGGT TGCTTGTAAC TCTCATCCTC CTCTTGCCTC TCATGCTTGG AGCATGCGGA
AAAGAATCGG AAAAGGCGTC AGCGTCTCCT GCGCCGCCCG AGGTGGATAT TGCCAGACCG
CTAATGCACA GCATCACCGA ATGGGACGAA TACATCGGAC GCTTTGAAGC CGTGGAGCAA
GTCAACGTGC GCACCCGGGT GACCGGCTAT CTGGTGAAAA AGAAATTCAA AGATGGCCAG
ATCGTAAAAA AAGGCGATGT GCTGTTTGTC ATCGACCCGC GGCCTTTTAA ATACGCCATG
CAGCGCGTCG AAGCACAGTA CGCGTTGGCG CAAAAAGAAT ACCGGCGGGC CGAAGAGTTG
CGCAAAACCC GGGCCATTTC CCAGGAAGAT TTCGACCGGC GCCTGCAGGA GTTGAAAGTT
GCGAAGGCAG CACTGAACGA CGCCAGGCTC GATGTGGAAT TTACCGAGGT TACCGCTCCG
ATCGATGGAA AAATCAGTGA CGGTTTTGTC GATATCGGCA ACCTTGTCCG GGAAAATGAA
ACGATCCTGA CCCGGATCGT CTCGGTCGAT CCGATTCATT TCACCTTCGA TGCCTCCCAG
GGAGAATTGT TAAAGAACCT TCGACACGAC CGGATCGAAA AGTGGACGGG CGCCGATGCC
AGGCCCAAGC CGATTTTCAT CAAGCTGCAG GATGAAGACC GTTACCTTCA TGAGGGGCAG
ATGGATTTTG TCGATAACAG GGTGGATCCC GGCACGGGAA CCATTCAGGC CCGTGCCCTG
GTTGAAAACA GGGATGCGCT CCTGTATCCG GGGATGTTCG GTCGGGCTCG TTTGACCAGC
AGAGGGGAGT ATCAGGCGGT TCTGCTGCCG GAAAAAGCCA TCAATACCGA CCAGGACAAG
AAGTTCGTTT ATGTCGTCGA CAGTGCAAAC AAGGCAGGCC GAACCTACGT CACCCCCGGT
CCTGTTCTCG ACAATGGCTT TGTTGTTATC CGGGACGGAT TGATCGGTGA TGAACTGGTG
GTCGTAAATG GCGTACAGCG TATCCGCCGG GCCGACCAGA TCATTACACC CGTTGAAACG
AAACTGGCGT GGATTGCTCC GGGAACCATG CCGGGCCGCA ACACGGTCCC CGATCTGCTG
GAGATAGCCG ACAGCCAGGC CCAGCCGACA CTTGCGGCCG GCGATGCCAT AGCGCAGGCG
GATTAA
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| Protein sequence | MRGLLVTLIL LLPLMLGACG KESEKASASP APPEVDIARP LMHSITEWDE YIGRFEAVEQ
VNVRTRVTGY LVKKKFKDGQ IVKKGDVLFV IDPRPFKYAM QRVEAQYALA QKEYRRAEEL
RKTRAISQED FDRRLQELKV AKAALNDARL DVEFTEVTAP IDGKISDGFV DIGNLVRENE
TILTRIVSVD PIHFTFDASQ GELLKNLRHD RIEKWTGADA RPKPIFIKLQ DEDRYLHEGQ
MDFVDNRVDP GTGTIQARAL VENRDALLYP GMFGRARLTS RGEYQAVLLP EKAINTDQDK
KFVYVVDSAN KAGRTYVTPG PVLDNGFVVI RDGLIGDELV VVNGVQRIRR ADQIITPVET
KLAWIAPGTM PGRNTVPDLL EIADSQAQPT LAAGDAIAQA D
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