Gene Pcar_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1097 
Symbol 
ID3723882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1289098 
End bp1290198 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content52% 
IMG OID637750687 
ProductZn-dependent hydrolase 
Protein accessionYP_356516 
Protein GI77918701 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCCA CGCTGCTCAA TAACTGTAGC GGTTCCGCCC ACCCCCGATC ATCTCTGTCG 
CTGGACAGGG ATCTGAAAAA GCCCGTAAAG GTTACAAAGG GTGGACGGCT GGAGCATGCT 
CGCATCCTGT GGGATTTCTT TTTCAATAAA CCTGCGGATA CACGTCCCTC GGGAAAAATC 
CCTGTGCAGG CAATGACAAA AGAGCAGTTG TTGGCTGCCC CGAACAATAC GGTGTATCGC 
CTTGGACACT CAACTGTTCT TATGAAGCTG CATGACGCTT TCTGGATAAC CGACCCCATG 
TTCTCCGATC GCGCTTCTCC TATCCAGTGG GCAGGGCCAC AACGGTTTCA CAATCCCCCG 
ATAAGCATTG AAGACCTGCC ACCGATCAAG GCGGTCATCA TCTCTCACGA CCATTACGAT 
CACCTGGATC ATGACTCAAT CATGAAGCTG ACCGGAAAGG CAGAGTATTT TCTGACGCCG 
CTCGGGGTGG GAGATATTCT TATGGGATGG GGGGTGCCGG CATCCAAGGT GAGGCAACTG 
GATTGGTGGC AGGGCACTGA GGTTGACGGT GTCCGTTTTG TTGCTACGCC TGCGCAACAC 
TTTTCCGGTC GTGGTCTATT CAACAAGAAT CGGACTCAAT GGGCTTCATG GGTCATCATG 
GCCGGCGACC GCCGCGTGTT TTTCAGCGGA GATTCAGGCT ATTTCGATGG CTTCAAAAAA 
ATCGGCGAAA AATACGGTCC CTTTGATCTG ACCTTGTTGG AAACAGGTGC CTACGATGCA 
AATTGGCCAG AGGTTCATAT GCATCCGGAA GAAACCATCC GGGCTCATAT CGATCTGCGA 
GGTAAAAAAC TGCTTCCTAT TCATAACGGC ACTTTTGATT TGTCCATGCA CTCCTGGCGC 
GATCCCTTTG ACAGGATAAC CGCTCTCGGG AAGATTCAGC GCATACCGAT CATTACGCCC 
GAAATGGGTG AACAGGTCAG TATGCAAAAC CCGGGGAGCT GGCATACGTG GTGGGCCTAT 
GTGGATAGAG AGAAAGAGCC TGGCCAGGTA CATGTGCAAG GCAAGCAGGT GCAGGACCTC 
CCCGGAAAGA GCTACTTATG A
 
Protein sequence
MASTLLNNCS GSAHPRSSLS LDRDLKKPVK VTKGGRLEHA RILWDFFFNK PADTRPSGKI 
PVQAMTKEQL LAAPNNTVYR LGHSTVLMKL HDAFWITDPM FSDRASPIQW AGPQRFHNPP 
ISIEDLPPIK AVIISHDHYD HLDHDSIMKL TGKAEYFLTP LGVGDILMGW GVPASKVRQL 
DWWQGTEVDG VRFVATPAQH FSGRGLFNKN RTQWASWVIM AGDRRVFFSG DSGYFDGFKK 
IGEKYGPFDL TLLETGAYDA NWPEVHMHPE ETIRAHIDLR GKKLLPIHNG TFDLSMHSWR 
DPFDRITALG KIQRIPIITP EMGEQVSMQN PGSWHTWWAY VDREKEPGQV HVQGKQVQDL 
PGKSYL