Gene Pcar_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1078 
Symbol 
ID3723902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1268650 
End bp1269168 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content51% 
IMG OID637750669 
Productputative flavodoxin 
Protein accessionYP_356498 
Protein GI77918683 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGGA CGACACAAAA AATCTGGACC GACAGTGAAA AAGTTCTGGT TATTTATTTC 
TCCCGCTCCG GCAACACTCG GGAAATCGCC CATCGGATCC ATCAGATTGT GGGCGGGGAC
ATCGTGGAAA TTGAACCGGC CGACCCGTAT CCCGAAGACT ACAATGCGGT TGTGAAGCAG
GCCAAGGCAG AGCTGAACTC AGGTTATAAA CCGCCGCTGA AGTCCAAAAT CGAAAATATC
GAATCCTGCG ATGTCATTTT CCTCGGGTCG CCAAACTGGT TGCAAACGAT AGCCCCGCCG
GTGCAATCGT TTCTGTCGCA AGCCGATCTC TCCGGAAAAA CCATTGCTCC TTTTATCACA
CACGGTGGCG GTGGCAGCGG GAGAAGCGTT GCGGATATCG CAGAGCTTTG CCAGGAATCA
ACTATTCTGG ATGCTCTTGT TGTTCGGGGA TGTAAACCGG GAAAAAACGC AATCGCGGAA
TGGCTGTCAA AATTATTCAG AAGATCCCAC AAACTCTGA
 
Protein sequence
MPRTTQKIWT DSEKVLVIYF SRSGNTREIA HRIHQIVGGD IVEIEPADPY PEDYNAVVKQ 
AKAELNSGYK PPLKSKIENI ESCDVIFLGS PNWLQTIAPP VQSFLSQADL SGKTIAPFIT
HGGGGSGRSV ADIAELCQES TILDALVVRG CKPGKNAIAE WLSKLFRRSH KL