| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1075 |
|---|
| Symbol | |
|---|
| ID | 3723899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1262355 |
|---|
| End bp | 1264151 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637750666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_356495 |
|---|
| Protein GI | 77918680 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.023264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCTTGG CATGTTTTCG AAACTGGATC GTGGTGTTCG TGCTGGCGCT GTTTTCCCTC
GGCTCGGTGG CTTTTGCGCA AAGCCCGGAG GAGGACGCTC AGAAACCCCT TACCGTCGCG
AACCAGTTGC GAGAGATGAT CGAGCCTTTT GTCAGCAGTG GTGGGGGTGC CGCTCCGGTT
CTGCAGATGG AAGGGCTGCA GGTCCAGCTG CATAAAGATC TGATTTCTTT TTATCGCCAG
CGTGGTTATC GCCCTGCCTG GTTTCATGAC GGACGTGTTA CCCCTGTGGC CCAGCAATGG
ATTGCGCGTG TGCAGGGTGT GGCCGCCGAA GGCTTGCGAC CGGCGGATTA TCATGTTGCC
ACCCTGGCTA CCTGCCTGGA ATTGGCGCAT CTTTCCCAGA GCTACGGAGT ACAATGCGAT
CCGACCGGCC TGGCCTTGCT CGACCTGTTG CTTAGCGACA GTTTTTTAAA ATTCGTATCC
CACCTGATAA ACGGAAGGGT CGATCCCGTT CAGCTCTATG CTGCCGAGTG GCAGTCTGCC
GTCTCCGCTA TCGATGCCGT TGGTGTTTTG CACCAGGTAC TGCGGAAGGG CGAGGTGGCC
GCGGTTTTGG AGGAGATTCT GCCTTACCGG GCCGGATATC AGAGGCTGGC GGTCTACCTG
GCTCATTATC GCCAGTTGGC TCTTGGCGGG GGATGGCCGG TTCTGGCGGA TGGACCACCG
GTAAGGCCTG GTGATCGCGA CGCCCGTCTG CCGGCCTTGA GGCGCTTTCT GGTGCTGGTC
GGCGACTTGG AATCATCCAG GCAGTCGTCG GGGTGGCGGA TGGACGCGGT GACCGTGGCG
GCTTTGAAAC GTTTTCAGGT TCGGCACGGT TTGCGTGCGG ACGGCGTACT GGGCAAGGAT
ACGCTGGCGC AGATCAATGT TCCGGTTGGC CGGCGGATAG AGCAGCTTGG TCTTAACCTC
GAGCGAGAGC GCTGGCCGAA GCAGGATGCG GGCGATCGCT ATCTACAGGT CGATATTACC
GATTTTACTT TGACGTTGGT CGACGGTGGG CGTGAAATCA TGCGCATGCC GGTGGTGGTC
GGTACCTCCT TTCGCCGTAC TCCGGTGTTT TCTGCACTAA TGACCTATCT GGTTTTTGCG
CCATACTGGA CGGTTCCCCC CACCATACTC GAGCAGGATA AATTGCCGGT AATCAAAGCC
AATCCCGATT ATCTCGACTC CCATCATTAT GAAATCGTGG CTTGGGGGAA GGATCCGAAT
CGTACTATCG ATGCGGCATC CATCGATTGG AAGACGATAA CGGCAAAGAG CTTTCCTGGT
ATGTTAAGGC AGAAACCGGG TCCCTGGAAT CCTCTGGGGA AAGTGAAGTT CATGTTCCCC
AATGCGTACC ATGTCTATCT GCACGATACC CCGGCCCAGT ATCTTTTTGC CAAACAGCAG
CGCACCTTCA GTTCCGGTTG TATCCGCATA GCCAGACCTC TGGAGCTTGC CATTTATCTG
CTTGACGGGC AAAAGGGGTG GGACTCGGAA CGCATAAAAA AGGAAATGGC CGCTTCCAAA
CCCTACACGG TCCGACTCAA AAATCCCATT CCCGTGCACA TTCTGTATCG CACAGCCTGG
GTCGATGTGC AGGGCCGATT GCAGTTTCGT AACGATGTCT ATGAGCGGGA TCAGGAGTTG
CAGGCAGCCT TGAAGCAGCG CCCGGAGTCC TCCGGGCAGA TGGCCGAGGT GACGATGCAG
GTGGGCGGCG AAGCCGCGGA CAGGCCTTCG GAGTCTGAGT CGGGCCTTGT CAGATAA
|
|---|
| Protein sequence | MSLACFRNWI VVFVLALFSL GSVAFAQSPE EDAQKPLTVA NQLREMIEPF VSSGGGAAPV
LQMEGLQVQL HKDLISFYRQ RGYRPAWFHD GRVTPVAQQW IARVQGVAAE GLRPADYHVA
TLATCLELAH LSQSYGVQCD PTGLALLDLL LSDSFLKFVS HLINGRVDPV QLYAAEWQSA
VSAIDAVGVL HQVLRKGEVA AVLEEILPYR AGYQRLAVYL AHYRQLALGG GWPVLADGPP
VRPGDRDARL PALRRFLVLV GDLESSRQSS GWRMDAVTVA ALKRFQVRHG LRADGVLGKD
TLAQINVPVG RRIEQLGLNL ERERWPKQDA GDRYLQVDIT DFTLTLVDGG REIMRMPVVV
GTSFRRTPVF SALMTYLVFA PYWTVPPTIL EQDKLPVIKA NPDYLDSHHY EIVAWGKDPN
RTIDAASIDW KTITAKSFPG MLRQKPGPWN PLGKVKFMFP NAYHVYLHDT PAQYLFAKQQ
RTFSSGCIRI ARPLELAIYL LDGQKGWDSE RIKKEMAASK PYTVRLKNPI PVHILYRTAW
VDVQGRLQFR NDVYERDQEL QAALKQRPES SGQMAEVTMQ VGGEAADRPS ESESGLVR
|
|---|
| |