Gene Pcar_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1070 
Symbol 
ID3723894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1256444 
End bp1257697 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content58% 
IMG OID637750661 
Productferredoxin 
Protein accessionYP_356490 
Protein GI77918675 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000000699309 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGT TTATCACGAT GTGGTTGGCG CTGTTGCTTC TGTCGATTGG GCATGTTTCC 
GTATCCGCAT CGGTTGACGT GACGGTCGAC CCCGAGATGA CGTTCGCAGA ACTGGCCCAT
GCCTGCAACC TTCGCGGCGG TGTTTTGGCC GACGCTCTGG GGCTGGATCG CCCCATCGAC
AAACAGCTGT CCCTGCGGGA ACTCGGCGTG ACGGACAAGG CGGTACAGGA TCTTCTGTCG
TCGGGTGTTG CCTTGGAGCC CCTTTCCAGC GAACCGCTCA TGCGGGGCCG GGGGCGCGGC
AAGGGGCGTG GCCATAACCC GAACGCAGAA GACGCCGAAG GCGCTTCCCG CGGAGATGGC
CGCCACCGGG AAACGCAAGC TGTACCCGAT TTATACAACT ACCTGCTGTG GCCCGTTCTG
CTTGGCGGCG TGTTGTGGTG GCTGCTGCGC GGCGGCCGAT TTGAACGTGG GTGTCCGCTG
CCTGTGGCAA AGCGTTATAG TCCCCTGGCT TTCCATGCCA CGCTGGCCCT GGTGGTGCTG
TTTTTCGGAT TTGCCAGTGG TAAGTCGCCC AATCCCATGG AAGGTCTGGT GAAATTTGTT
AAAGCCCTGG CAGGCTTTTA TGACGACCCC TGGATAAAGC TCGGTTTTTT GCTGTTTTTC
ACCCTTATGG CATTATTGGG CAGCAAGTTG ATATGCGGTT GGGGGTGTCC TTTCGGTGCC
TTGCAGGAAT TGGTCTACGA TCTGCCGCTG CTGCGCCGGT ATAAAAATCT GCGATTGCCG
TTTCTTTTCA CCATGACGGT GCGCACGCTT ATTTTCGCAT CGTTTCTGAT CATTGTTTCC
GGTGTCACCG GGACTCGATG GGTGTTGTAT CACGGCCTCA ATCCTTTCAA CCTGTTCGGT
TTCGAGTTCA GCCAGGTTTC CATCGGCATT GCCGTGGCGG TCAGTCTGCT CCTGTCGCTG
GTCATCTACC GGCCTTTCTG TCAGCTGGTC TGTCCTTTTG GCTGGTACGC CTGGTTTCTG
GAAAAAATCA GTCTGACCGG CGTGCGCATC GACTCCCAGA TCTGTGTCGA CTGCGGGGCT
TGCGATCGCG CCTGTCCGGT CGAGGCCGCC AAAGACCGTC TGGCCGGTAA AAAGTGGCCT
GCCGAGTGTT TTTCCTGTGC GCGCTGTTTG CGGGTGTGTC CTGTGGATGC CATCGATTAC
GGGCCGCGTT GGCGGCAAAA AAGTGGTGCC GGATCCGCTG AGGTGAAGAA GTAA
 
Protein sequence
MKSFITMWLA LLLLSIGHVS VSASVDVTVD PEMTFAELAH ACNLRGGVLA DALGLDRPID 
KQLSLRELGV TDKAVQDLLS SGVALEPLSS EPLMRGRGRG KGRGHNPNAE DAEGASRGDG
RHRETQAVPD LYNYLLWPVL LGGVLWWLLR GGRFERGCPL PVAKRYSPLA FHATLALVVL
FFGFASGKSP NPMEGLVKFV KALAGFYDDP WIKLGFLLFF TLMALLGSKL ICGWGCPFGA
LQELVYDLPL LRRYKNLRLP FLFTMTVRTL IFASFLIIVS GVTGTRWVLY HGLNPFNLFG
FEFSQVSIGI AVAVSLLLSL VIYRPFCQLV CPFGWYAWFL EKISLTGVRI DSQICVDCGA
CDRACPVEAA KDRLAGKKWP AECFSCARCL RVCPVDAIDY GPRWRQKSGA GSAEVKK