Gene Pcar_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1054 
Symbol 
ID3723917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1236610 
End bp1237116 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content55% 
IMG OID637750645 
Producthypothetical protein 
Protein accessionYP_356474 
Protein GI77918659 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000000335957 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGTT CGGCACAAGA ATGGATCGAC CACCTGGATT TGATCCGCCA TCCGGAAGGC 
GGCTATTTCC GCGAATCATA CCGTGCCTCG GAAACCATAC CCGCCAACGC TTTGCCGCAT
CGCTACCAGG GCTCACGCCA CTATGCCACG ACCATTTACT ACCTGCTGCA GAGCAACGAC
TTCTCTGCTC TGCATCGCCT GGCATCCGAT GAAATATGGC ATTTTTATAG CGGCTCGCCC
CTTGATATCC ATATCATCGA CCCCGGCGGC CAATATCGCA GGGCATGCCT TGGGAACGAT
CCTCAAAAAG GTCAATCCTT TCAGATAGTC ATTACAGCCG GATGCTGGTT CGGCGCCACG
GTCACCCGAC AAGACAGTTA TACCCTTACC GGATGCAGCG TATCGCCGGG ATTCGATTTT
GCCGATTTCG AACTGGCGGA CCGACAGTCC CTTATCGCCG CATACCCGGC CCATGCCGAT
GTTATCCGAC GCCTTACACG TCGATGA
 
Protein sequence
MQRSAQEWID HLDLIRHPEG GYFRESYRAS ETIPANALPH RYQGSRHYAT TIYYLLQSND 
FSALHRLASD EIWHFYSGSP LDIHIIDPGG QYRRACLGND PQKGQSFQIV ITAGCWFGAT
VTRQDSYTLT GCSVSPGFDF ADFELADRQS LIAAYPAHAD VIRRLTRR