| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1038 |
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| Symbol | icd |
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| ID | 3723940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1215189 |
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| End bp | 1216586 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637750629 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_356458 |
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| Protein GI | 77918643 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.000173439 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTACC AACATCTCAA AGTTCCTCAA GGCGAAAAAA TCACCCTCAA AAACGGGCGG
CTACACGTTC CCGACCACCC CATTGTTCCC TTTATCGAAG GTGACGGCAC CGGTCCCGAT
ATATGGCAGG CCGCCGTGCG GGTTTTTGAT GCGGCTGTGG AAAAAGCCTA CAAGGGCAAA
CGCCGCATCA GCTGGATGGA GGTCTACGCC GGGGAAAAAG CCTTCAACAT GCAGCTCGGG
TGGCTTCCGG ACGAAACCCT GCAAGCTTTC AACGATTTCC TGGTCGGCAT CAAAGGTCCG
CTGACCACCC CTGTAGGGGG CGGCATACGC TCCTTGAACG TGGCTTTGCG TCAGGAACTC
GATCTATTTG TCTGCCTGCG ACCGGTTCGC TACTTTGAGG GGGTACCCTC GCCGGTCAAA
AAACCCGAGG ACGTCGACAT TGTTATTTTC CGGGAAAACA CCGAAGATAT CTACGCCGGC
ATCGAGTGGC AGGCGGGCAG CGCCGAAGCG CAAAAAGTCA TCCACTTCCT GCAGCAGCAG
ATGGGCATAG GCAAAATACC CTACTCCGAA GCGACCGGCA TCGGCATCAA ACCGATCTCC
CGCCCGCGCA CCGAACGGCT GATTCGGGCC GCGATCCAGT ACGCCATCGA TCACCATCGC
CATTCCGTGA CCCTGGTCCA CAAGGGGAAC ATCATGAAAT TCACCGAGGG GGCCTTCAAA
CAGTGGGGCT ACGAGCTTGC CGCCCGGGAA TTCCGTGAGC AGATCGTAAC CGCCCGCGAG
AGTTGGATTC TCGCCAACAA GGACGATCAT CCCGAGCTGG GCGATGAGGA AATCGCCCGC
ATGATCGACC CCGGCTACGC CATGATGACC CCCGAACAGC AAGCGGAAAT TCGTCAGGAA
GTAGCCGCCA CCCTTGCCAC CCTGCTGCCG ACCCATGGCA ACGGACAGTG GCGGGAGAAG
ATCATGATAA AGGACGCCAT TGCCGATATT GCCCTGCAAC AGGTTTTAAC CCGGGCCAGC
GAATTCGATG TCATCGCCAC CATGAATCTC AACGGCGACT ACCTGTCCGA TGCGCTGGCC
GCACAGGTCG GCGGGATCGG CATCGCGCCA GGGGCCAATA TCAACTACCA GACGGGGCAT
GCCATCTTCG AAGCCACCCA CGGCACGGCC CCCAAATACG CCAACCTGGA CAAGGTCAAC
CCCGGATCCG TCATTCTGTC CGGCGTTTTG ATGCTGCAAC ACCTCGGCTG GCAAGAGGCC
GCCGAGCTGA TTGTTCGAGC CATGGAGAAA ACCATCGGCC AAAAGCGCGT CACCTACGAC
TTTGAGCGCC TCATGGACGG CGCCACACTG CTGAAATGTT CGGAGTTCGG CAGTGCCCTT
ATTGATAATA TGGTTTAA
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| Protein sequence | MTYQHLKVPQ GEKITLKNGR LHVPDHPIVP FIEGDGTGPD IWQAAVRVFD AAVEKAYKGK
RRISWMEVYA GEKAFNMQLG WLPDETLQAF NDFLVGIKGP LTTPVGGGIR SLNVALRQEL
DLFVCLRPVR YFEGVPSPVK KPEDVDIVIF RENTEDIYAG IEWQAGSAEA QKVIHFLQQQ
MGIGKIPYSE ATGIGIKPIS RPRTERLIRA AIQYAIDHHR HSVTLVHKGN IMKFTEGAFK
QWGYELAARE FREQIVTARE SWILANKDDH PELGDEEIAR MIDPGYAMMT PEQQAEIRQE
VAATLATLLP THGNGQWREK IMIKDAIADI ALQQVLTRAS EFDVIATMNL NGDYLSDALA
AQVGGIGIAP GANINYQTGH AIFEATHGTA PKYANLDKVN PGSVILSGVL MLQHLGWQEA
AELIVRAMEK TIGQKRVTYD FERLMDGATL LKCSEFGSAL IDNMV
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