| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1034 |
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| Symbol | |
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| ID | 3723936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1209662 |
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| End bp | 1213204 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637750625 |
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| Product | NifJ-like oxidoreductase, Fe-S subunit |
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| Protein accession | YP_356454 |
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| Protein GI | 77918639 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGAC AAAAAGTTTC CATCGACGGC AATACCGCCG CGGCACATGT GGCACACGCT
ACCAATGAGG TTATCGCCAT TTACCCCATT ACGCCCTCTT CCAACATGGG GGAAATATCG
GATATCAAAA GTGCCCAGGG CGAAAAAAAT ATCTGGGGGA CGGTACCCCT GGTTACGGAA
ATGCAATCGG AGGCCGGAGC GGCCGGGGCC GTCCACGGCG CCCTGCAGGC CGGCGCCCTG
ACCACGACCT TCACGGCCAG CCAGGGTTTG CTATTGATGA TCCCCAACAT GTTTAAAATC
GCCGGCGAAC TGACCCCGAC GGTATTCCAT GTCTCGGCAC GGGCCATCGC CGCCCAGGCC
CTGTCGATCT TTGGCGATCA TTCCGACGTC ATGGCCTGCC GTTCCACCGG ATTCGCCATG
CTCTCCTCCA ACAACCCCCA GGAGGTTATG GACTTCGCTC TCATTGCGCA GGCCGCCACC
CTGCGTTCAC GTGTTCCCTT CCTGCACTTT TTCGATGGAT TCCGCACCTC CCACGAAATC
CAGAAAATCG AAGAGCTCAC CTTCGACGAC ATGCATGCCA TGCTCGACGA GGACCTGATC
GCCGACCACC GGGCCCGGGC CCTGTCGCCG GACCATCCGG TGCTTCGCGG GACCTCGCAA
AATCCGGATG TCTATTTCCA GGGACGGGAA ACCGTCAATC GCTTCTACCG GGCCACTCCC
GGCATCGTCC AGGAAGAAAT GGATAAACTC GCCGGGCTTA CCGGGCGCCA GTACCGCCTG
GTCGATTACG TCGGTGCTCC GGATGCCGAA AAGGTCATCG TCCTGATGGG CTCCGGCGCC
GATACGGTGC ACGAAACCGT CGAAGCCATG AACGCCGCCG GCGAAAAGGT CGGCATGCTC
AAGATCCGCC TCTACCGCCC CTTCCCCGCG GAGGCCTTCC TTGCAGCCCT GCCCGCCTCG
GTGCGCAAAA TCGCGGTACT GGACCGCACC AAAGAGCCCG GCTCCCTCGG CGAACCGCTG
TACCTCGACG TGCGCGGCGC CATCGCCGAA GCAGCCGCCA CGGCATCCGT ACCGACCGTC
GTCGGCGGAC GTTACGGTCT CGGATCCAAG GAATTCACCC CCGCCATGGT CAAGGCGGTT
TACGACAACC TGGATCTTGC CGAACCGAAA AACCATTTCG TCGTCGGCAT CGAGGACGAT
GTCTGCGGCA CCAGTCTCCC CGTCGATGCC TCCTACAGCA ACGACGCTTC GGGGATTTAC
TCGGCCATGT TCTACGGTCT CGCCTCCGAC GGCACCGTCG GCGCCAACAA GAACTCCATC
AAGATCATCG GCGACCTGAC GGACAACCAT GTGCAGGCCT ACTTCGTCTA CGACTCCAAA
AAAGCCGGCA CGATCACGAC TTCGCATCTG CGCTTCGGCA AGACCCCGCT GCGTTCGCCG
TACCTGGTCA GCAACGCCGA CTTCGTCGCC TGCCACAACT TCACCTTCCT GGAGAAGTGC
GACATGCTCT CCAAGGCCAA GCCCGGCGCG ATGTTCCTGC TGAACTCCCT GTTCGACAAG
GATACGGTCT GGGAGCAGAT CCCCCGCGAG GTGCAGCAAC AGATTATCGA CAAAAACCTG
CGGCTGTTCG TCATCAACGC CGTGGACATC GCAGAAAAGA TCGGTCTGGG CGGGCGTATC
AACGTCATCA TGCAGACCGC GTTCTTCAAG ATTACCGGCA TCCTGCCCAT GGATACGGCC
CTGGACGCCA TCAAGGATGC GATCCGCAAA ACCTACGGCA AAGCCGGGGA AAAAGTGGTG
GATATGAACT GCCGTGCCGC CGATGCCGCC CTGAACGACA TCGCCGAGGT GACCATCCCG
GCAACGGCCG ACAGCGCTCT TTGCAAACCG CCGCTGGTGA CTCCCGGGGC CCCGGCCTTC
GTGCAGGATG TGGTCGCCAC CATCATCGCC GGCCAGGGCG ACAGTCTGCC GGTATCGAGC
ATGCCGGCGG ACGGCACCTT CCCCACCGCC ACCTCCCGTT ACGAAAAGCG CAACATCGCC
CTGGAAATTC CGGTGTGGGA CGAGCACCTT TGCGTCCAAT GCGGTCTGTG CTCCTTCGTC
TGCCCCCATG CAACCCTGCG CATGAAAATC TATGATGCCT CCTACCTGGA GCAGGCACCG
CAGACCTTCC GCACTGTCGA TGCTCGCGGC GCGGAATTCG AGGGGAATAA ATTCACCCTG
CAGGTGGCTC CCGAGGATTG CGTCGGTTGC GGTATCTGCG TCGAAGTGTG CCCGGTCAAA
GACCGCCAGG ATGCTTCCCG CAAAGCCCTG AACATGCAAT TCAAGGTGCC CCTGCGTGAG
CAGGAAGCTG TCAACTGGGA TTTCTTCATG GCCCTGCCCG AAACCGATCC GGCCAAGGTC
AAGCGCGACA CCCTGAAGGG CAGCCAGTTG CTGAAACCGT TGTTCGAATT CTCCGGCGCC
TGCTCGGGCT GCGGCGAAAC ACCTTATCTC AAACTTATGT CCCAGTTGTT CGGCGACCGT
GCGCTGATCG CCAATGCCAC CGGCTGCACC TCCATTTACG GCGGCAATCT GCCGACCACT
CCCTGGGCCA CCCGCGATGA CGGACGGGGC CCGGCCTGGT CCAACTCCCT GTTCGAGGAC
ACGGCGGAAT TCGGTTTCGG TATGCGCCTG GCGGTGGATA AATTCAGCGA AGCCGCCGGC
GAACTGCTGG CCCAGATTAT CGATTGCAAC TGTGCCGGCT GCCCGGCCGA CAAGGACCTT
TTGCTGGCCA TCCGAGATGC CGACCAATCC ACCCAGGTCG CTATCGAGGA GCAACGTGCC
CGGGTCGCGC AACTCAAACA GGTGCTGGCC AACTGCGACG ATCCGGCCTC CAAGCGTCTC
GCCACCCTTG CCGATTACCT GGTGAAAAAA TCGGTATGGT GTGTCGGCGG CGACGGCTGG
GCCTACGACA TCGGCTACGG CGGCCTGGAT CATGTTATCG CCACGGACAA GAACGTCAAC
CTGCTGGTAC TCGACACGGA AGTCTACTCC AACACCGGCG GTCAGGCTTC CAAGTCGACT
CCCCTTGGCG CCGTGGCCCA GTTTGCCGCA GGCGGCAAAA ACATGCCCAA AAAAGACCTC
GGCATGATGG CCATGTCTTA CGGCACCGCC TACGTGGCCA GCGTCTCCCT GTCCAATCCG
GCCCAGGCCA TCAAGGCCTT CATGGAGGCG GAAGCGTTTG ACGGACCGTC CATCATCATT
GCCTATGCCC ACTGCATCGC CCATGGCATC GATATGACTA AAGGGATCGA CACCCAGAAA
AAAGCGGTAT CCTGCGGCCA CTGGCCCCTG TACCGCTACA ACCCGGAGCG GGCCGCTAAG
GACCTGAACC CGCTGCAACT CGACAGCAAG GCACCGACCC TCTCCTTCGG GGAGTTTGCC
GACACCCAGA ACCGCTTCCG GGCGCTGAAA AAGGTCAATC CCGATGCGGC CGGCGAGCTT
ATCGAGCGGG CCGACGCCTG GGCCCGTCGC CGTTTCGCCC TTTATCAAAA ACTGGCGGAT
TAA
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| Protein sequence | MTRQKVSIDG NTAAAHVAHA TNEVIAIYPI TPSSNMGEIS DIKSAQGEKN IWGTVPLVTE
MQSEAGAAGA VHGALQAGAL TTTFTASQGL LLMIPNMFKI AGELTPTVFH VSARAIAAQA
LSIFGDHSDV MACRSTGFAM LSSNNPQEVM DFALIAQAAT LRSRVPFLHF FDGFRTSHEI
QKIEELTFDD MHAMLDEDLI ADHRARALSP DHPVLRGTSQ NPDVYFQGRE TVNRFYRATP
GIVQEEMDKL AGLTGRQYRL VDYVGAPDAE KVIVLMGSGA DTVHETVEAM NAAGEKVGML
KIRLYRPFPA EAFLAALPAS VRKIAVLDRT KEPGSLGEPL YLDVRGAIAE AAATASVPTV
VGGRYGLGSK EFTPAMVKAV YDNLDLAEPK NHFVVGIEDD VCGTSLPVDA SYSNDASGIY
SAMFYGLASD GTVGANKNSI KIIGDLTDNH VQAYFVYDSK KAGTITTSHL RFGKTPLRSP
YLVSNADFVA CHNFTFLEKC DMLSKAKPGA MFLLNSLFDK DTVWEQIPRE VQQQIIDKNL
RLFVINAVDI AEKIGLGGRI NVIMQTAFFK ITGILPMDTA LDAIKDAIRK TYGKAGEKVV
DMNCRAADAA LNDIAEVTIP ATADSALCKP PLVTPGAPAF VQDVVATIIA GQGDSLPVSS
MPADGTFPTA TSRYEKRNIA LEIPVWDEHL CVQCGLCSFV CPHATLRMKI YDASYLEQAP
QTFRTVDARG AEFEGNKFTL QVAPEDCVGC GICVEVCPVK DRQDASRKAL NMQFKVPLRE
QEAVNWDFFM ALPETDPAKV KRDTLKGSQL LKPLFEFSGA CSGCGETPYL KLMSQLFGDR
ALIANATGCT SIYGGNLPTT PWATRDDGRG PAWSNSLFED TAEFGFGMRL AVDKFSEAAG
ELLAQIIDCN CAGCPADKDL LLAIRDADQS TQVAIEEQRA RVAQLKQVLA NCDDPASKRL
ATLADYLVKK SVWCVGGDGW AYDIGYGGLD HVIATDKNVN LLVLDTEVYS NTGGQASKST
PLGAVAQFAA GGKNMPKKDL GMMAMSYGTA YVASVSLSNP AQAIKAFMEA EAFDGPSIII
AYAHCIAHGI DMTKGIDTQK KAVSCGHWPL YRYNPERAAK DLNPLQLDSK APTLSFGEFA
DTQNRFRALK KVNPDAAGEL IERADAWARR RFALYQKLAD
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