Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1022 |
Symbol | amt |
ID | 3723963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1199516 |
End bp | 1200865 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637750613 |
Product | ammonium transporter |
Protein accession | YP_356442 |
Protein GI | 77918627 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT GGGCAAGTAT TTTGGGCGCC GGCCTGCTGC TGGCTTTACC GGCTCTGGGT TGGGCCGAAG ACGCACCCCT CACCGCCGAT GCGGTGCAGA ACAACCTTAA CTTTGTCTGG ACGTTGATTG CCGCGTTCAT GGTTTTCATC ATGCAGGCCG GTTTTGCCAT GGTGGAAGTC GGCTTCACCC GTGCTAAAAA CGCCTGCAAT ATCCTGATGA AGAACATGAT GGACTTCTCT GCCGGTGCCA TCGGTTTCTG GGCGGTCGGT TTCGGCCTGA TGTTCGGAAC CACCAACGGT TTCTTCGGTA CCACCGATTT CTTTTTTAGC GGTGCTACCG GTGATGCCGA AGCCTGGAAC TACGCTTTCT GGATGTTTCA GACCGTGTTT GCCGCTACCG CAGCCACCAT CATTTCCGGT GCCGTAGCCG AACGTACCAA GTTCAGCGCC TATCTGGTTT ACTCGGTGCT GGTTTCGGCC TTTGTTTATC CCATTTTCGG CAGCTGGGCC TGGGGCAGCC TCTACAACGG CAGCGGCTGG CTCGAAGGTC TCGGCTTCAT CGATTTCGCC GGCTCGACCG TGGTTCACTC CATGGGTGGC TGGCTTGCCT TGGCCGGCGC CATCGTCGTC GGTCCCCGTA TCGGCAAGTT TGATAAAGCG GGCAACGTCA AGCCCATCCC CGGTCACAAT ATCCCGTTGG CCGCTCTGGG CGTATTCATC CTGTGGTTCG GCTGGTACGG TTTTAACCCC GGATCCACCA CCGTCGGTGA CACTTCCATA GCTTTGATTG CCGTAACCAC CACCCTGGCC GCTGCTGCCG GTGCCATTAC CGCCATGCTC GCCACCTGGC TGAAGTACGG CAAAAGCGAT ATCGGTATGA CCTTGAACGG TGCCTTGGCC GGCCTGGTCG GCATTACCGC CGGTTGCGCC AACGTTAGCC CGCTGTCGGC TGTGATTATC GGCGGCATTG CCGGCGTACT GGTCCTCTTC TCGGTTCTGT TCTTCGACAA GATCAAGGTT GACGATCCGG TTGGTGCCGT TTCCGTTCAT GGTGTTTGCG GCGCCTGGGG TACCCTCGCT GCCGGGCTGT TCGATAGCGC CGGCTTCTCC CTGAAGACCG TAGGCGTGCA GTTGACCGGT ATCGGTGCCT GTTTCGTTTT CGCCTTCGGT GTCGGCCTGA TCATGTTCAA ACTGATCGAT GTGGTTATCG GCATGCGCGT ATCCAAGGAA GAAGAAATGG CCGGTCTCGA TTACACCGAG CACGGTGCTT CGGCTTACCC CGATTTCCAG ACTGTCCGTC TCGGTACGGT ATTCGCCCCC GGTCAGGAAA ATGTGAACGG TCCTAAATAA
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Protein sequence | MKKWASILGA GLLLALPALG WAEDAPLTAD AVQNNLNFVW TLIAAFMVFI MQAGFAMVEV GFTRAKNACN ILMKNMMDFS AGAIGFWAVG FGLMFGTTNG FFGTTDFFFS GATGDAEAWN YAFWMFQTVF AATAATIISG AVAERTKFSA YLVYSVLVSA FVYPIFGSWA WGSLYNGSGW LEGLGFIDFA GSTVVHSMGG WLALAGAIVV GPRIGKFDKA GNVKPIPGHN IPLAALGVFI LWFGWYGFNP GSTTVGDTSI ALIAVTTTLA AAAGAITAML ATWLKYGKSD IGMTLNGALA GLVGITAGCA NVSPLSAVII GGIAGVLVLF SVLFFDKIKV DDPVGAVSVH GVCGAWGTLA AGLFDSAGFS LKTVGVQLTG IGACFVFAFG VGLIMFKLID VVIGMRVSKE EEMAGLDYTE HGASAYPDFQ TVRLGTVFAP GQENVNGPK
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