| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1017 |
|---|
| Symbol | |
|---|
| ID | 3723958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1192504 |
|---|
| End bp | 1193391 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637750608 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_356437 |
|---|
| Protein GI | 77918622 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.203689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAC TAACCGTTGG CCTGGTGCAA CAAAGCTGCA GCGCCGACCG GCAGAACAAT
CTGGAGAAAA GTGTGGCCGG CATTCGTCAG GCCGTATCGC AGGGGGCACA ATTGGTGGTT
TTGCAGGAAC TGCACACCAG CCTCTACTTT TGCCAGACGG AAGATACCGA CTGTTTCGAT
CTGGCCGAGA CGATCCCGGG TCCATCGACG GACCTGTTCG GGCAGATCGC CAGAGAGCTC
AACGTGGTCA TCGTGACATC GCTGTTCGAG CGCCGCGCCG CCGGACTCTA TCACAACACC
GCCGTGGTCT TCGAAAAAGA CGGCACCATC GCCGGCCGCT ACCGGAAGAT GCACATCCCC
GACGACCCGG GATATTACGA AAAATTCTAC TTCACCCCCG GCGACCTCGG CTTCACCCCC
ATCACGACCT CGCTGGGTAA ACTCGGCGTG TTGGTCTGCT GGGATCAATG GTATCCGGAA
GCCGCCCGGC TCATGGCCAT GGCCGGCGCC GAAATGCTCA TCTACCCCAC CGCCATCGGC
TGGGATCCAC GCGACGATGA CGCCGAACGG CAACGCCAGC GCGATGCCTG GGTCACCATC
CAGCGCGCCC ATGCCGTGGC CAACGGCCTG CCCGTCATCG CCGTCAACCG TACCGGCTTC
GAATCATCAC CCGATCCGCA GGCAGCGGGA TCTCAATTCT GGGGAAAGAG TTTCGTTGCC
GGCAGCCAGG GGGAAATCCT TGCGCAAGCT TCCGAAGATA AAGAGGAGAC CTTGGTGGTC
ACAATCGACC GGGGGCGCAG CGAACAGGTC CGCAGAATCT GGCCGTTTTT ACGGGATCGG
CGGATCGACG ATTACGGGGG GCTGGTTAAA CGCTTTCTGG ACAAATAG
|
|---|
| Protein sequence | MNELTVGLVQ QSCSADRQNN LEKSVAGIRQ AVSQGAQLVV LQELHTSLYF CQTEDTDCFD
LAETIPGPST DLFGQIAREL NVVIVTSLFE RRAAGLYHNT AVVFEKDGTI AGRYRKMHIP
DDPGYYEKFY FTPGDLGFTP ITTSLGKLGV LVCWDQWYPE AARLMAMAGA EMLIYPTAIG
WDPRDDDAER QRQRDAWVTI QRAHAVANGL PVIAVNRTGF ESSPDPQAAG SQFWGKSFVA
GSQGEILAQA SEDKEETLVV TIDRGRSEQV RRIWPFLRDR RIDDYGGLVK RFLDK
|
|---|
| |