| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1015 |
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| Symbol | |
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| ID | 3723956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1189947 |
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| End bp | 1191413 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637750607 |
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| Product | outer membrane protein |
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| Protein accession | YP_356436 |
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| Protein GI | 77918621 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1.22355e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCATA GGGTCTGCTT TAGCCCAATC ATCCTGACCA CCTTTTTTTT AATTTTTTCG
TCTCAGGGGA TAGGCGCCCC ATTAAAAACA ACGGGAAACA CTGTTAAATC CCCTGTTTCT
CTGGAAAATT GCATTCAGAT GGCATTGAAA AACAATCATC GCCGTCCCGC CTCCCGGTAT
GCGGTTGAAA TGGCCGAAGC CCAACATCGC CAGGCACTGG CCGGCTACTG GCCACAGGTC
ACCGCCAAGG GGGGATTTAC GCGCATGGAT GAGCCGACCA ATTTCCTGTT TCCGGCCAAA
AGTTTCAATG TTCCTGCGAC AACCGTCACG GTCGCCACCC CGATGGGCCC TATGCCCATA
ACCACTCCGG CGCAGGAAAT GCAGATCCCC GAACAGGATG TCAAAATAAT GGATCGGGAT
ACGTACTTTG CATCGGTCGA AGCGACTTGG TTGCTATACG ACGGCGGGAT GCGTAAAGGA
TATCGCGAAC AGGCCAAGAG CCTTGTTGAC ATGATGAAAC AGGAGTCCCG ACGTACCGAC
CTGGAGATCG TGGACAGTGT CACGCGACTT TATTACGGAG CGGTCCTGGC AGCACAATTG
CACAGTATCG CTAAAGATAC CCTGGAGCGG ATGGAGGCGA CCCTCAATCT TACCGAAACC
ATGTACAAAG AAGGCTCGGG CCGGGTGAAA AAAACCGACT TTCTCGGCAA CAAGGTAATG
GTTGAATCGC TGCGCTCGAT GGTTGCCCTG CTGGAAAAAA ATGCCTTAAT AGCCCGTGCA
GCTCTCGCCA ATACCATGGG TCTTCCCTGG AACGACAGCG TAACTCCGGC GGAAACGGCC
ATGCCGTTCA CTCCCTTTCC CGACAATCTG GAACACCTGG TAAGCAGCGC CTACCGATTC
AATCCCGACT GGGCAAAAAT CGAAGCAGGG ATATCCGCAG CGCAGGGAGC TATACGCACC
GCCGTGAGCG AACATTATCC CAAGCTGGCG TTAACCGGCG AACTGCATAA ATGGTGGAAC
GATTACAATA CGGGAGCGGT TACCGACGAA AATAAGGAGG GCTGGAGCGT CGGAATCGGC
ATCGAAATTC CGATCTTCAG CGGCTTTTTA ACCCAGAACA AGGTATCGGA AGCCAAAGCC
CGCCTGGCCA AAATCAAAGA GGAACAACTT CTTTTCAAAG AGGGGATCGG TCTACAGATT
CGAGATACAT TCCTCTCCCT GAATGCCGCC GAAAAATCGT ATCAGGCAAC CCTCGAGGCC
ATGAACGCAG CCGTAGAAAA TCGCGACCTG AATACCCGGG CTTATCGACA CGAGTTGGTG
GAGACCGAAG ATGTCATTCG TGCCCAACTG ATGGAATCAT TTATGGCCGC ACAACATTAC
AAGACGCGCT ACGACCATCT GGCTCTTCGG TCCCGGTTGA AACTGTTGGT AGGAACCGAA
ATACAGCATA AACTGATCCG GCAATGA
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| Protein sequence | MFHRVCFSPI ILTTFFLIFS SQGIGAPLKT TGNTVKSPVS LENCIQMALK NNHRRPASRY
AVEMAEAQHR QALAGYWPQV TAKGGFTRMD EPTNFLFPAK SFNVPATTVT VATPMGPMPI
TTPAQEMQIP EQDVKIMDRD TYFASVEATW LLYDGGMRKG YREQAKSLVD MMKQESRRTD
LEIVDSVTRL YYGAVLAAQL HSIAKDTLER MEATLNLTET MYKEGSGRVK KTDFLGNKVM
VESLRSMVAL LEKNALIARA ALANTMGLPW NDSVTPAETA MPFTPFPDNL EHLVSSAYRF
NPDWAKIEAG ISAAQGAIRT AVSEHYPKLA LTGELHKWWN DYNTGAVTDE NKEGWSVGIG
IEIPIFSGFL TQNKVSEAKA RLAKIKEEQL LFKEGIGLQI RDTFLSLNAA EKSYQATLEA
MNAAVENRDL NTRAYRHELV ETEDVIRAQL MESFMAAQHY KTRYDHLALR SRLKLLVGTE
IQHKLIRQ
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