| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1010 |
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| Symbol | |
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| ID | 3723951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1182748 |
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| End bp | 1184634 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637750602 |
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| Product | putative response regulator |
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| Protein accession | YP_356431 |
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| Protein GI | 77918616 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCAGG AACCGATTAT GACACCGCGC ATACTCATCG TCGACGACAA CCAATCGATC
CATGACGATT TCAAAAAAAT ATTAACCAAA AAGAATGCTG CTGATACAGC TTTGGACGAT
CTCGAAGCGG CCCTTTTCGG CGATAGTAAT CAATCTTTTT CAGCCCCCGA TTACATCATC
GATTTCGCCT GCCAGGGGCA GGAGGCTTTG GCCATGGTCG AACAAGCCGA AAGCGAAGAG
GCACCATATT CTCTGGCCTT TGTCGATGGG CGTATGCCAC CTGGTTGGGA CGGCATTGAA
ACGATCGTCC ATCTCTGGAA AGCCAGTCCC GAATTGCAAA TTGTTCTATG TACGGCTTAT
GCCGATTACA CCTGGGATGA AATCCAACAT AAATTGGGAG ACACAGACAG CCTGGTTATC
CTGAAAAAGC CCTTCGACAT CGCCGAAGTC CTTCAATTGG CCCATACCAT GACCCGCAAA
TGGGAACTAA ACCGCCAGAT TCAGGGTCGT TTGCATAGAC TGGCCTATTT CGACAATCTG
ACCGGATTGC CGAACCGCAC CCAATTTCTG GAATCGTTAA ACAAAACCCT GGCCATCGCA
CAAAGGAAAC AAAAGCAAGC CGCTTTGCTG TTTATCGATC TCAACGATTT CAAAAGGATT
AACGATACCC TGGGACACAG CATGGGGGAC AAATTGCTCG AAATTGTTGC CAAACGACTT
GCTGGATGTA TCCGGGAATC CGATCTTTTG GGAAGCACAT GCGAGGGCAG CAAAACCGCA
AGACTCGGAG GGGATGAATT TACCGTCCTG CTACCGGAGG TGGAATCGGA GCAGTTTGTT
GCAACGGTGG CCAAACGCAT ATTTCATTGC CTGACACGAC CGGCTGATCT CGATAAACAC
CAGGTCATGG TCACACCGAG CATCGGTATA GCCTTATTCC CCAATGACGG CAAAGACGCA
GAAACACTCA TGAAATGTGC TGATATGGCG ATGTATTTCG CCAAAAACAG GGAGCCGGAA
AATTATCGAT TTTATCAGGA ATCAATGAAC ACCGAAGCAT TGAAACGTTT GGCCATCGAA
ACACAATTAC GTCATGCCCT GCAAAGACAA GAATTATCTC TTGTCTATCA ACCGCAATTC
GATCTAAACA CCGGGGCGGT CAGCGGCCTG GAGGCTCTGC TACGCTGGGA CAACCAGGAA
CTTGGGCAAA TTCCGCCTAA GGAGTTCATA CTGATCGCTG AAGAGACCGG TATAATCTAC
GATCTCGGCC ATTGGGTGAT GTGCACGGCA TGTAATCAGG TAAAAACATG GCACAACATG
GACATCGAAT TACCCCGCAT AAGCGTCAAC GTATCCCCTA AAGAATTTAT TCATCCGGAC
TTTTTGTCCA ATGTCAAAAC GGCCCTGGAC GAAAGTGGCC TGGAGCCAGG GGGATTGCAG
ATAGAAATAA CAGAAACCCT TCTAATGGAA CATTACGAAG GCACAGCCAA AATCCTCGAA
GAACTCAGCC GAATGGGCGT CCAGATTGCT ATCGACGATT TTGGTAAAGG ATATTCAAGT
TTAAACAGAC TGCATACATT GACGATCGAC TGTCTCAAAA TAGACCGCTC CTTCGTCAAT
GGAATCAGCG TGGGGTTCAA AGAACAGTCG GTTATCAAAG CAATTATCAG CATGGCCAGT
GCCATGAATC TGAAAGTCAT TGCCGAGGGG GTGGAAACAG AAAATCAGTT TACATTTCTC
AAAGACAAGC ATTGTCAGGA AGCCCAAGGC TATCGCCTAA GCCTGCCACT GACAACGGAG
CAGGCTGAGT ATTTTTTGCG GAAGACAAAA ACTTCCGAAA TAAGCACCTA TCCTGGTCAA
TATCCTCCGG GGCTTCCCTG CTCCTGA
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| Protein sequence | MHQEPIMTPR ILIVDDNQSI HDDFKKILTK KNAADTALDD LEAALFGDSN QSFSAPDYII
DFACQGQEAL AMVEQAESEE APYSLAFVDG RMPPGWDGIE TIVHLWKASP ELQIVLCTAY
ADYTWDEIQH KLGDTDSLVI LKKPFDIAEV LQLAHTMTRK WELNRQIQGR LHRLAYFDNL
TGLPNRTQFL ESLNKTLAIA QRKQKQAALL FIDLNDFKRI NDTLGHSMGD KLLEIVAKRL
AGCIRESDLL GSTCEGSKTA RLGGDEFTVL LPEVESEQFV ATVAKRIFHC LTRPADLDKH
QVMVTPSIGI ALFPNDGKDA ETLMKCADMA MYFAKNREPE NYRFYQESMN TEALKRLAIE
TQLRHALQRQ ELSLVYQPQF DLNTGAVSGL EALLRWDNQE LGQIPPKEFI LIAEETGIIY
DLGHWVMCTA CNQVKTWHNM DIELPRISVN VSPKEFIHPD FLSNVKTALD ESGLEPGGLQ
IEITETLLME HYEGTAKILE ELSRMGVQIA IDDFGKGYSS LNRLHTLTID CLKIDRSFVN
GISVGFKEQS VIKAIISMAS AMNLKVIAEG VETENQFTFL KDKHCQEAQG YRLSLPLTTE
QAEYFLRKTK TSEISTYPGQ YPPGLPCS
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