| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1007 |
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| Symbol | |
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| ID | 3723985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1178961 |
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| End bp | 1180535 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637750599 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_356428 |
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| Protein GI | 77918613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0135347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGA TTCGATTGTA CGATACCACC CTGAGAGATG GCACCCAGGC CGAAGAGATA
TCCTTTCTGG TCGAGGATAA AATCCGTATC GCCCAAAAAC TTGACGATCT GGGGATTCAT
TATATCGAAG GCGGGTGGCC GGGGTCCAAT CCCAAGGACA TCAGCTTTTT TCAGGAAATC
CGCAAAATTT CCCTGCGCCA GACCAAAATT GCGGCGTTCG GTTCGACCCG CCGGGCCAAA
ACGACCCCGG ACAAGGATAA CAATCTGCGC ACCCTGATCC AGTCCGCGCC GGATGTGGTT
ACCATCTTCG GTAAAACCTG GGATTTTCAT GTGCGCGAAG CGTTGCGTAT CAGTCTGGAC
GAAAACCTGG ATCTCATCAA CGATTCCCTG CTGTATCTGA AGCGGCACGT TGAGGAGGTG
TTCTATGATG CCGAGCACTT TTTCGATGGC TACAAGGCCA ATCCCGCGTA TGCCATAAAA
ACGCTTCAGG CGGCCGAACA GGCCGGTGTG GACTGCATCG TGTTGTGCGA TACCAACGGC
GGTACCCTGC CTTTCGAACT GCCGCCGATC ATTGCCGAGG TCCGCAAGCA TATTTCCACG
CCGCTGGGTA TCCATTCCCA TAATGACAGC GAATGCGCCG TGGCCAATTC TCTGGTGGCT
GTCGATTGCG GTATTGTGCA TGTGCAGGGA ACCATCAACG GGTTCGGGGA ACGCTGCGGT
AATGCCAATC TGTGTTCCAT CATTCCTTCG CTGATGTTGA AAATGGGCAA GGAGAGCCTT
ACCAACGAGC AGCTTGCCTC GTTGCGGGAA GTCTCGCGTT TCGTCTACGA ACTGGCCAAC
CTGGTGCCCA ACAAGCACCA ACCTTTCGTG GGCAACTCCG CGTTTGCCCA TAAAGGCGGG
GTGCATGTTT CCGCGATTCA GAGACATTCC GAAACCTATG AACACATCCG TCCGGAGCGG
GTTGGCAACA TCAGCCGTGT GCTGGTTTCC GATTTGTCGG GGCGTTCCAA CATCCTGGCC
AAAGCTGAGC AATTCAATAT TAAGCTGGAC AGCAAGGATC CGCTGACGAT TGAAATTCTG
GAACGCCTTA AGGAATTGGA AAACCAGGGC TATCAATTCG AAGGCGCCGA AGCATCCTTT
GATTTGCTCA TGCGCCGCGC TTTGGGAACC TTACGGCCGT TTTTTTCCGT GGTCGGCTTT
CGCGTCATCG ACAGCAAGCG CGAGGGAGAG GATAAGCCTT TCTCCGAGGC CACCGTGCAG
GTCAAGGTCG GTGGACATGT GGAACACACG GCTGCCGAAG GCAACGGCCC GGTCAATGCT
CTGGACCATG CCCTGCGCAA GGCCCTGGAA AACTTTTACC CTCAAATCAA AGACATGCAA
CTGCTCGATT ACAAAGTCAG GGTTCTCCCG GCAGGCCAGG GAACGGCTTC GGTGACCAGG
GTTCTCATTG AATCGGGCGA CGCCGATTTA CGCTGGGGAA CGGTAGGGGT CAGCGATAAT
ATTATCGATG CATCCTATTA TGCCCTGGTG GATGCTTTTC AGTACAAACT CTTGAAAGAC
AGTGACGCTT CCTGA
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| Protein sequence | MTAIRLYDTT LRDGTQAEEI SFLVEDKIRI AQKLDDLGIH YIEGGWPGSN PKDISFFQEI
RKISLRQTKI AAFGSTRRAK TTPDKDNNLR TLIQSAPDVV TIFGKTWDFH VREALRISLD
ENLDLINDSL LYLKRHVEEV FYDAEHFFDG YKANPAYAIK TLQAAEQAGV DCIVLCDTNG
GTLPFELPPI IAEVRKHIST PLGIHSHNDS ECAVANSLVA VDCGIVHVQG TINGFGERCG
NANLCSIIPS LMLKMGKESL TNEQLASLRE VSRFVYELAN LVPNKHQPFV GNSAFAHKGG
VHVSAIQRHS ETYEHIRPER VGNISRVLVS DLSGRSNILA KAEQFNIKLD SKDPLTIEIL
ERLKELENQG YQFEGAEASF DLLMRRALGT LRPFFSVVGF RVIDSKREGE DKPFSEATVQ
VKVGGHVEHT AAEGNGPVNA LDHALRKALE NFYPQIKDMQ LLDYKVRVLP AGQGTASVTR
VLIESGDADL RWGTVGVSDN IIDASYYALV DAFQYKLLKD SDAS
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