| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1004 |
|---|
| Symbol | |
|---|
| ID | 3723982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1176529 |
|---|
| End bp | 1176978 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637750596 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_356425 |
|---|
| Protein GI | 77918610 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.00024412 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAG CCCGTGATAT CATGACCAGC GAAGTACATA CGGTTTCCAT GGAAACCAGC
GTCGATGAGC TGGCCCGTTT GTTTGTCAAG ACCGGGGTCA GCGCCATGCC AGTGGTCGAT
TCCGAAGGCA TGTTGCAGGG TATCGTGACG GAGACCGATC TCGTTGCCCA GGATAAGCCC
TTGCATATCC CGACGGTCGT ATCCCTGTTC GACTGGGTCG TTTATCTGGA GAGCGAAGAC
CGTTTCGCCG AGCAGGTAAA GAAAATGACC GCCCAGAAGG TGCGGGAAAT CTGTACCACC
GATGTAGCGA CCTGCTCGCC TGACGAACCG GTTTCCCAGG TTGTCGCCGT GATGCTGGAA
AAGTCGGTAC ATATGGTGCC GGTGGTGCAG GAAGGTAAAC TGCTGGGGGT CGTTGCGCGG
CTCGATATCA TTCGCAACAT GGAGCTCTAA
|
|---|
| Protein sequence | MLKARDIMTS EVHTVSMETS VDELARLFVK TGVSAMPVVD SEGMLQGIVT ETDLVAQDKP
LHIPTVVSLF DWVVYLESED RFAEQVKKMT AQKVREICTT DVATCSPDEP VSQVVAVMLE
KSVHMVPVVQ EGKLLGVVAR LDIIRNMEL
|
|---|
| |