| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0975 |
|---|
| Symbol | |
|---|
| ID | 3723046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1145451 |
|---|
| End bp | 1146491 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637750566 |
|---|
| Product | putative choline transport or trimethylamine permease |
|---|
| Protein accession | YP_356398 |
|---|
| Protein GI | 77918583 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2510] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 3.4103099999999997e-20 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATG GAGTCGCAGC AGCAGCGGTT GGTAGCTCTT CCTCGACGAA GGCTATCGCA
AGAGATCTTA GTAACAGACG AAAACTGAGC CACGCCAAGG CTGGCCTTTT ATGGGGCGCA
TTCGGCGGCC TGTCATGGGG CTTTGCCGGG GTTGTCATGG GCATCGCCTT TGCGATGGCT
CCCTTTACCG GCGGTGCAAC TATCTTTACC GGCCCCCTGG TCGGTGCCGC CATGCACGAC
GGTTTCGCCG GAATCTTCCT GACCTTCACC AACATCTTCT CAGGGCGAGG CAGTGAAATC
TTCCGCACCT TGAAGACCTG GCCCGGCATC CTGGTCTGCC TTGCCGCCAT TTTCGGCGGT
CCCATCGCCA TGGGTGGCTA TCTGCTGGGT ATCGAATTTG CCGGAGCATC CTATGCGTTG
TCCATCACCG CCATGTTCCC CGTGGTCGGC ACCATCCTGG CGGCTATTTT CCTCAAAGAA
AAAATCACCC CACTGGTCTG GGCCGGGATC ATTCTGTCGG TTATCGGCGC CTTGATCGTC
GGCTGGACCC CGCCCGAAGG TGGCAACATG CCACATTTCT ACCTCGGCAT CGGCTGCGCA
CTGCTGGCCT GCTTCGGCTG GGGTATTGAA GGCGTGCTCT CCACTTTCGG CATGGACATG
GTGGATCCCG ATATCGCCAT CAGCATTCGC GAATCGGTAT CCTGCATCGT ATCCCTGGTC
GGCGTTCTGC CCTTCGTTGC CGGCTGGGCC CTGCTCGGTG AAGCACTGAC CACCTTCAAC
AGCCTGTGGA TCCTTGCATG CGCCGGCGTC ATCGGCGGCA TCTCCTACAT GGCCTGGTAC
AAATCCCTGA ACATGACCGG TGTCGGCCGC GCCATGGCGC TTAATATCAC CTACGTCATC
TGGGGCATTG TATTCGGCTT CTTCATGACC GACCTGCAGT TGACCACCAA CCTGGTCGTC
GGCGGTCTGA TCATCACCGT GGGCGGCATT CTGGTTGTGT GTAACCCCAA AGAACTTCTC
AACTTGCGTC AGGGAGCTTA A
|
|---|
| Protein sequence | MANGVAAAAV GSSSSTKAIA RDLSNRRKLS HAKAGLLWGA FGGLSWGFAG VVMGIAFAMA
PFTGGATIFT GPLVGAAMHD GFAGIFLTFT NIFSGRGSEI FRTLKTWPGI LVCLAAIFGG
PIAMGGYLLG IEFAGASYAL SITAMFPVVG TILAAIFLKE KITPLVWAGI ILSVIGALIV
GWTPPEGGNM PHFYLGIGCA LLACFGWGIE GVLSTFGMDM VDPDIAISIR ESVSCIVSLV
GVLPFVAGWA LLGEALTTFN SLWILACAGV IGGISYMAWY KSLNMTGVGR AMALNITYVI
WGIVFGFFMT DLQLTTNLVV GGLIITVGGI LVVCNPKELL NLRQGA
|
|---|
| |