Gene Pcar_0950 details

Gene Information

• Locus tag: Pcar_0950
• Symbol: atpC
• ID: 3724130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1120052
• End bp: 1120468
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637750541
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_356373
• Protein GI: 77918558
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 0.594443
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCAGA AACTGAAACT GGAGATGGTG ACGCCCGCCG CCCAGGTGCT CATCGAGGAG 
GTCGACGAAA TCGCCGCCCC GGGCAGCCTG GGGCAGTTCG GCGTGCTGCC GGGACATACG 
CCTTTGCTGA CTACCCTGCA GGTGGGGGAA TTCAGCTACC GCAAGGGCAG CGATGTCTAT 
TACCTGGCGG TGAACTGGGG GTATGTGGAA GTGGCCGAGG ACCGGGTGCT GGTGCTGGTG 
GAAACCGCCG AAACCCAGGA CCATATCGAC CTGGCACGGG CCAAAGCGGC CCTGGGACGG 
GCCGAGGCGC GGTTGCGGGA GCTGACCCCG GCGGACAAGG AATACCACAA CATGCAGGCG 
GCTCTGCAGC GCGCCATGGT GCGGATCCAG GTGGCCGGGC GTGGTGGGCG CGGCTGA 

 

Protein sequence

MAQKLKLEMV TPAAQVLIEE VDEIAAPGSL GQFGVLPGHT PLLTTLQVGE FSYRKGSDVY 
YLAVNWGYVE VAEDRVLVLV ETAETQDHID LARAKAALGR AEARLRELTP ADKEYHNMQA 
ALQRAMVRIQ VAGRGGRG