| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0949 |
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| Symbol | atpD-1 |
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| ID | 3724129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1118443 |
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| End bp | 1119849 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637750540 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_356372 |
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| Protein GI | 77918557 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.740096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACG GCAAAATCAC CCAGGTTATC GGCCCGGTCA TCGATGTCGA ATTCGAAGCC
GGGGAGCTTC CCGAGATCTA TTACGCCCTC AAGGTCAGCA ATCCCAGCCT CGGCGACGAG
CCCTGGAACC TGGTGGCCGA GGTCGCCCAG CATTTGGGGG AAAACACCGT GCGCGCCATC
GCCATGGATT CCACCGACGG TCTGGTGCGC GGCCAGGAAG TGCTCAACAC CGGCCGCCAG
ATCAGCGTGC CGGTCGGGCG CGGCACCCTG GGGCGCATCC TCAACGTTAT CGGCGAACCG
GTGGACGAAC AGGGGCCGGT GGAGACCGAC ACCACCTGGG AGATCCACCG TCCCACCCCC
GAATTCGTCG ACCAGTCGAC CAAGGTCGAA GCGTTTGAAA CCGGTATCAA GGTCGTCGAT
CTGCTCGCGC CCTACGCGCG CGGCGGCAAG ATCGGCCTGT TCGGCGGCGC CGGGGTCGGC
AAGACCGTGC TGATCATGGA ACTGATCCAC AACATCGCCA AGAAACACGG CGGCTTTTCG
GTTTTCGCCG GGGTCGGCGA GCGTACCCGC GAAGGCAACG ACTTGTGGAA CGAAATGAAA
GAATCCAACG TCTTGGACAA GACCGCTCTG GTCTACGGGC AGATGAACGA ACCGCCCGGA
GCCCGTGCCC GCGTGGCGCT GTCGGCGTTG ACCGTGGCCG AGTACTTCCG CGATCAGGAA
AACCAGGACG TGCTGCTGTT CGTCGACAAC ATCTTCCGCT TTACCCAGGC CGGTTCCGAG
GTTTCGGCGC TGCTCGGCCG CATCCCCTCG GCTGTCGGTT ATCAGCCGAC CCTGTCCACC
GAAATGGGCG AGCTGCAGGA GCGTATCACC ACCACTAAGA ACGGTTCCAT CACCTCGGTA
CAGGCCATCT ACGTGCCCGC CGACGACCTT ACCGACCCGG CGCCGGCCAC CACCTTTGCG
CATCTCGACG CCACCACCGT TTTGTCCCGG CAGATCGCCG AGCTCGGCAT CTACCCGGCC
GTCGATCCCC TCGACTCCAG CAGCCGCATC CTCGATCCGC AGGTGCTCGG CGAAGAGCAC
TACCAGGTTG CGCGTGACGT GCAGTACGTG CTGCAGCGCT ATAAGGATTT GCAGGACATC
ATCGCCATTC TGGGGATGGA CGAACTGTCC GAAGAGGATA AGCAGACCGT CTCCAGGGCG
CGCAAGATCC AGCGCTTCTT GTCCCAACCG TTCCACGTGG CGGAGATCTT TACCGGCACG
CCGGGCAAAT ACGTGGAACT GAGCGAGACC ATCCGCGGTT TCAAGGAGAT CGTCGAAGGC
AAGCACGACA GCGTGCCCGA GCAGGCTTTC TACATGGCCG GCGGCATCGA CGAAGTACTG
GAGAACGCCG CCAAGATGGC GTCGTAA
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| Protein sequence | MSNGKITQVI GPVIDVEFEA GELPEIYYAL KVSNPSLGDE PWNLVAEVAQ HLGENTVRAI
AMDSTDGLVR GQEVLNTGRQ ISVPVGRGTL GRILNVIGEP VDEQGPVETD TTWEIHRPTP
EFVDQSTKVE AFETGIKVVD LLAPYARGGK IGLFGGAGVG KTVLIMELIH NIAKKHGGFS
VFAGVGERTR EGNDLWNEMK ESNVLDKTAL VYGQMNEPPG ARARVALSAL TVAEYFRDQE
NQDVLLFVDN IFRFTQAGSE VSALLGRIPS AVGYQPTLST EMGELQERIT TTKNGSITSV
QAIYVPADDL TDPAPATTFA HLDATTVLSR QIAELGIYPA VDPLDSSSRI LDPQVLGEEH
YQVARDVQYV LQRYKDLQDI IAILGMDELS EEDKQTVSRA RKIQRFLSQP FHVAEIFTGT
PGKYVELSET IRGFKEIVEG KHDSVPEQAF YMAGGIDEVL ENAAKMAS
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