Gene Pcar_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0941 
Symbol 
ID3724121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1110824 
End bp1111855 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content56% 
IMG OID637750532 
Producthypothetical protein 
Protein accessionYP_356364 
Protein GI77918549 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.000102128 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACG GGGTGCAAAC AGCAAGTATG GCCGGAACAC GTGTTTCGGC ACGGCAGGTT 
TTCGAACAAA AGGAGCTGGG GTTTGTCAAG CGCGGACTGG CGACGGCGCT CGGCTCCGGC
ATGTTGTGGG GGCTCGACGG TGTCATTCTG GGCATCGCTC TGGCGATGGC TCCCTTTACC
GCTGGTGCGA CGATGTATGC GGCACCGCTG GCCGGTTCGG CCCTGCACGA CGGTTTCGCC
GGTCTATGGC TGGCCCTTTA CAACCTTTTC ACCGGTCGCT GGAAAGATAT CGGCCGATCT
CTGAAAACCT TTCCCGGTTT TATCGTCTGT GTAGGCGCTC TACTTGGCGG CCCTATCGGT
ATGGGAGCCT ATCTGCTCGG TATTAACTTT GCCGGTGCGG CCTACGCTAT GGGCATCTCG
GCCGGGTATC CGGTGGTGGG CGCTATCATG GCCCGCCTGA TTCTCAAGGA AAAGATCAGT
CCGCGTGTCT GGTTCGGGAT TATTACCTGT GTAACCGGCG CGGTTATTCT CGGCTACGTT
CCGCCCGAGG GCGGCACCAT GCCGCACTTC TATCTTGGTA TCGGTTGCTC TTTACTGGCA
GCGTTTGGTT GGGGTACTGA AGGTGTTTTG GCTACCTTCG GGATGGACAT GGTCGATCCG
GCTGTCGCCA TTAATATCCG CGAGGCTACT TCCTGTCTTG TTTCCTTGCT GGCAGTTCTT
CCGTTTGTCG CTGGAGTTGC TGTTTTCGGT CAGGCGCTGA TTACGCCTAA TGTTGTGTGG
ATTATCGCCC TCGCAGGGTT GGCTGGTGGT TTCTCCTACC TGCTCTGGTA CAAGGCTTTC
AGCATGTGCG GATGCAGCCG CTGCATGGCT CTGAATATTA CCTATGCCAT CTGGGGTCTG
GTGTTCTCTT ACTTCCTGAC GGATGTCGCG ATTACCACCA ACCTGGTGAT TGGTGCTGTT
GTCATCACCA TTGGCGCCAT CATGGTTGTT GGCAATCCTA AAGAAATGAT CAACCTGCGG
GCGGAGGCTT AA
 
Protein sequence
MANGVQTASM AGTRVSARQV FEQKELGFVK RGLATALGSG MLWGLDGVIL GIALAMAPFT 
AGATMYAAPL AGSALHDGFA GLWLALYNLF TGRWKDIGRS LKTFPGFIVC VGALLGGPIG
MGAYLLGINF AGAAYAMGIS AGYPVVGAIM ARLILKEKIS PRVWFGIITC VTGAVILGYV
PPEGGTMPHF YLGIGCSLLA AFGWGTEGVL ATFGMDMVDP AVAINIREAT SCLVSLLAVL
PFVAGVAVFG QALITPNVVW IIALAGLAGG FSYLLWYKAF SMCGCSRCMA LNITYAIWGL
VFSYFLTDVA ITTNLVIGAV VITIGAIMVV GNPKEMINLR AEA