| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0940 |
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| Symbol | |
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| ID | 3724120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1109108 |
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| End bp | 1109935 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637750531 |
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| Product | putative DEOR-type transcriptional regulator |
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| Protein accession | YP_356363 |
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| Protein GI | 77918548 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.000268196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAGG ACAACGGAAA GACAGCCAAA TCCAACGGAC AGCACAACAA TAGCGACCAG
TTACTGCCCG CAGAACGGCA CATGCGTATC CGTGACCTGC TTCAGGAACG GTTAACTATC
CGGGTAGCCG AACTGAGCGA AATGATGGGC GTGTCGGAGA TGACCATTCG GCGCGACCTG
GAAACTCTCG AACGGCAGGG CCTGCTTGAG CGCACATACG GCGGTGCAGT CTATCGTCAG
GAACGCATGA CCCACGAAGA GCCCTACGAA ACCCGCCTCA AAGAGCTGCC CGACATCAAG
GACCAGATCG GCCGCAAGGC CGCGTCGCTG ATCGAACCTC ACGACACCCT GTTCCTCCAT
TCCGGCACCA CCGCCCTGTA TGTGCTGCGG CACCTCGATC CCGATATGCC GGTGCGCGTC
TACACCAACA ACGTCGGAGC CATTCAGGAA ATCAAGGGCA AACGGGCGGA GTTGATTCTT
CTGGGAGGCG AATACCGGCC GGAGACCCAC TCCATGGAAG GGTCTCTGAC CATGGAAACC
CTGCAGGAAA TTCATCCCAA AAAAGCTTTC CTGATCCCCG ACGGCATCAG TTTTCGTGAC
GGCATCACCA CGCCCTCATT CACCGAAGCC GCTCTTGAAC GCGCCATGAT CCAGCAAACC
AGGGGACAGG TCATCGTGTT GGCCACCCAC AGTTCCTTCG GCCGGGTTGC GGATCTCGTG
GTGGCCCCCA TAGAAAAGGT CGATCTGTTG ATCGTCGACC ACAAACTGCC CGAGGAATAC
CTGCACGACC TTAAAGCTCT CGGCATCCGG GTCCTGGTGG CTGATTAA
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| Protein sequence | MVEDNGKTAK SNGQHNNSDQ LLPAERHMRI RDLLQERLTI RVAELSEMMG VSEMTIRRDL
ETLERQGLLE RTYGGAVYRQ ERMTHEEPYE TRLKELPDIK DQIGRKAASL IEPHDTLFLH
SGTTALYVLR HLDPDMPVRV YTNNVGAIQE IKGKRAELIL LGGEYRPETH SMEGSLTMET
LQEIHPKKAF LIPDGISFRD GITTPSFTEA ALERAMIQQT RGQVIVLATH SSFGRVADLV
VAPIEKVDLL IVDHKLPEEY LHDLKALGIR VLVAD
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