| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0907 |
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| Symbol | dppD |
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| ID | 3724165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1070978 |
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| End bp | 1071934 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637750499 |
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| Product | putative ATP-binding component of dipeptide transport system |
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| Protein accession | YP_356331 |
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| Protein GI | 77918516 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00000823752 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCCCCC TTCTCGAAGT TCGTAATCTG CGCACCTACT TCTTCACCCA AACCGCTCTG
ACCAAAGCTG TGCGTGGCAT CGACTTCACC CTCCACGCGG GCGAAACCCT GGCATTGGTA
GGTGAGTCGG GTTGCGGAAA ATCGGTCACG GCCCTGTCCA TGCTGCGCCT TGTCCCGCCC
CCGGGACGCG TTGTGGAAGG AGAGATCCTG TTCCGGGGCG AGGATCTGCG CCTGTTGCCC
GAAACGGAAA TGCGCCGCAT GCGCGGCAAC AAAATCGCCA TGGTCTTTCA GGAGCCGATG
ACGGCACTTA ACCCGGTTTT TTGCGTGGGC GAACAAATTG CCGAGGTGTT ACGCGTTCAT
CAGGGACTCA AACGAAAGCA GGCCTTAAAA CAGGCCGTCG CCTTGCTCGC CCAGGTCGGC
ATTTCCTCGC CAGAACGCCG TTGCCGGGAA TACCCGCATC AACTGTCCGG CGGCATGCGC
CAGAGGGTGG TCATCGCCAT GGCCCTGGCC TGTCGCCCCC AGCTGCTGAT TGCGGACGAA
CCGACCACCG CGCTGGATGT AACGATCCAG GCGCAGATCA TGCAACTGCT CGATGATTTG
AAAACCCGCC ACCAGATGGC CATGCTACTG ATCACGCATG ATCTCGGAGT GGTTGCGGAA
ACAGCCGACA AGGTCGCTAT CATGCACGAC GGTCTGATCA TGGAATACGC CGGAGTAACC
GACATTTTCG ACGATCCGCG CCATCCATAT ACCCGCAGCC TGCTGGCCTG CCTGCCGAAA
ATCGGCCAGA AGCAACATCG CCTGGCTGTG AATCAGGACG CGACGACACC TCAAACACCG
GCTGCGGGAA CCTACCTGGA TAACTGTCCG GCGCCTTTCG CACCGGAAAC GGGCAAGCTT
CCCCCCATGA CGGAAGTGAC TCCCGGTCAC TATGTACGCT GCTGGAGGGA TGCATGA
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| Protein sequence | MPPLLEVRNL RTYFFTQTAL TKAVRGIDFT LHAGETLALV GESGCGKSVT ALSMLRLVPP
PGRVVEGEIL FRGEDLRLLP ETEMRRMRGN KIAMVFQEPM TALNPVFCVG EQIAEVLRVH
QGLKRKQALK QAVALLAQVG ISSPERRCRE YPHQLSGGMR QRVVIAMALA CRPQLLIADE
PTTALDVTIQ AQIMQLLDDL KTRHQMAMLL ITHDLGVVAE TADKVAIMHD GLIMEYAGVT
DIFDDPRHPY TRSLLACLPK IGQKQHRLAV NQDATTPQTP AAGTYLDNCP APFAPETGKL
PPMTEVTPGH YVRCWRDA
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