Gene Pcar_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0895 
Symbol 
ID3724192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1052983 
End bp1054050 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content60% 
IMG OID637750488 
ProductABC-type transport system, ATPase component 
Protein accessionYP_356320 
Protein GI77918505 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0323383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGC CTGTGCTTGC ATTGGAGCAT GTCACCCAGG CCTACGGCGA GCGCCGTGTG 
GTGAAAGACC TGACCCTGGC CTTGGACAAA GACCAAATCG GCTGTTTGCT TGGTCCCAGC
GGTTGTGGCA AGACCACCAC GCTGCGCATT GTTGCCGGTT TCGAGCCCCT GCTGGCAGGG
CGGGTGAGCG TCAATGGCAC GGTTGTCAGC CGTCCCGATT GGCTTCTGCC TCCGGAAAAA
CGAGCCATCG GCATGGTGTT TCAGGACTAT GCCCTGTTTC CGCACCTCTC GGTCCAGGAC
AACATCGGCT TCGGTTTGCT GCATCTGTCG CGTCGGGGAA GGCGATCCCG TATAGGCGAA
GTGCTGGAGT TGGTGGGCCT TTCGGAAAGT CGGCAGTGCT TCCCCCATGA ACTTTCCGGG
GGCCAGCAGC AGCGGGTCGC TCTGGCCCGT GCTCTGGCGC CACGACCTGC GCTGTTGCTC
ATGGACGAGC CATTTTCCAA TCTCGATGTC ACCCTGCGAG ATCGGCTGGC CCTGGAGGTG
CGGCAGATCA TCAAGTCCTA CGGCGCTACC GCCTTGTTCG TCACGCATAA CCAGCAGGAG
GCGTTCGCCA TCGCAGATCG CATCGGCGTG ATGGATGCCG GTGAGCTGCG GCAGTGGGAC
AGTGTCGTCG ATCTATACCG GAAACCGGCA GATCCCCAGG TCGCATGTTT TATCGGCGAA
GGGACGCTGG TGCCCGGGCG GGCTACCGCA GACGGTGCTA TTCATACCGA ACTGGGGCTA
TTTTTTGACG GCCAGGCGCA AACAGACGGT GGCCCGGTGC AGGTATTGCT GCGACCGGAA
GACATTTACC ACGACGAGTC ATCGGAAATA AAGGCCCGGA TCATTCAAAG CCAGTTTCGT
GGGGCGAACA TGTTTTGTCT TTTGGAAACC CCAAGTGGAC AACAGCTGCA GGCCCTCTTT
CCCGGGACAT GCGAATGGTC TGCCGGACAG AGCGTCGGCA TTTCTACCAA GCTGGGGAAA
CCGGTCTGCT TTCCCCTGGA TCTCTCCTCC CCTCCCTCCT CCATGTAA
 
Protein sequence
MDKPVLALEH VTQAYGERRV VKDLTLALDK DQIGCLLGPS GCGKTTTLRI VAGFEPLLAG 
RVSVNGTVVS RPDWLLPPEK RAIGMVFQDY ALFPHLSVQD NIGFGLLHLS RRGRRSRIGE
VLELVGLSES RQCFPHELSG GQQQRVALAR ALAPRPALLL MDEPFSNLDV TLRDRLALEV
RQIIKSYGAT ALFVTHNQQE AFAIADRIGV MDAGELRQWD SVVDLYRKPA DPQVACFIGE
GTLVPGRATA DGAIHTELGL FFDGQAQTDG GPVQVLLRPE DIYHDESSEI KARIIQSQFR
GANMFCLLET PSGQQLQALF PGTCEWSAGQ SVGISTKLGK PVCFPLDLSS PPSSM