Gene Pcar_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0890 
Symbol 
ID3724187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp1047664 
End bp1048740 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content61% 
IMG OID637750483 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_356315 
Protein GI77918500 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00000303038 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTT TGACTTTAAT TATGCTCGTA GCTGGCTTTA TCATCCTCAT CAGCGGCGCC 
GAACTGCTGG TACGCGGGGC GGCGCAACTG GCCTCGGATA TGGGTATTTC ACCGCTGGTG 
GTCGGCCTGA CCGTGGTTTC CTTCGGCACC AGCGCGCCGG AACTTGCCGT CAGCGTGTCT 
TCGGCCTGGA ACGGCCAGGC GGGCCTGGCC CTGGGCAACG TGGTCGGCAG CAATATCTGC 
AATATCCTGC TGATTCTCGG TGTTTCGGCA CTGGTCGCCC CCCTGATGGT ATCTCGCCAG 
GTAGTGCGCC TGGAAGTGCC GATCATGATC GCAGCAGCGG TTCTGTTGCT GCTGTTCAGC 
CTTAACGGCG GCCTGGAGCG CTGGGAAGGG TTGTTGATGT TCACCTGCGC CATGATCTAC 
GTGGTCTGGA CGGTTGTGCG CAGCCTCAGG GAGAACCGCG AGAAACCGCC CCAGTGCGAA 
TTGCCGGCCG GCCCCCGCCC GCGGCGGTTG TGGCAGATCG TGCAGATTGT GGCAGGGTTG 
GCCATGCTCG GCCTGGGCTC GCGCTGGCTG GTGCAGGGGG CTGTCACCAT CGCCACCTGC 
TTGGGGGTCA GCGACCTGGT GATCGGTCTG ACGGTGGTAG CCATCGGCAC CTCGCTGCCG 
GAACTCGCCA CTTCGGCCCT GGCCGCCTTA CGCGGCCAGC GGGACATCGC CGTCGGCAAT 
GTGGTCGGCA GCAACATCTT CAACATTCTC GTGGTGATGG GACTCACAGC CAGCGTGGCG 
CCTTCGACTA TCGCAGTGCC ACACCAGGCC CTGATGCTCG ATTTACCGAT CATGCTCGCG 
GCCTGTCTGG CCTGCTTGCC CATTTTTCTC ACGGGACATC GCATCGCCCG CTGGGAAGGG 
GGATTGTTTT TCGCCTATTT TATCGCTTAT ACCGTTTTTA CCGTCCTGAA CAGCCTGCAC 
CATCCCCGAA TGGGCCTGTT TGTTCAGGCT ATGGTCTTTT TCTTTATTCC CCTCTCCCTG 
GTCACGCTGA TTTTGTCCCT CTGGCGGAGC CTGCGTCAAC GACACAAAAT CACCTGA
 
Protein sequence
MDLLTLIMLV AGFIILISGA ELLVRGAAQL ASDMGISPLV VGLTVVSFGT SAPELAVSVS 
SAWNGQAGLA LGNVVGSNIC NILLILGVSA LVAPLMVSRQ VVRLEVPIMI AAAVLLLLFS 
LNGGLERWEG LLMFTCAMIY VVWTVVRSLR ENREKPPQCE LPAGPRPRRL WQIVQIVAGL 
AMLGLGSRWL VQGAVTIATC LGVSDLVIGL TVVAIGTSLP ELATSALAAL RGQRDIAVGN 
VVGSNIFNIL VVMGLTASVA PSTIAVPHQA LMLDLPIMLA ACLACLPIFL TGHRIARWEG 
GLFFAYFIAY TVFTVLNSLH HPRMGLFVQA MVFFFIPLSL VTLILSLWRS LRQRHKIT