| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0889 |
|---|
| Symbol | |
|---|
| ID | 3724186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1047056 |
|---|
| End bp | 1047454 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637750482 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_356314 |
|---|
| Protein GI | 77918499 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.00042649 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCA GGGAAGCCGA TTATTGCATT CGCACCATCT TGCACCTCTC CAGACCGGAA
CAACGAAAAC ATCCCGTTCC GGTGGATGAG CTATCCCGCC AGATGACTAT CCCCGCCCCC
TTCTTACGCA AAATCCTCGC AAAGCTCATC AACGCGGATC TGGTCCATAG CCATCGTGGA
CGTAACGGAG GACTGACCAT CAAGGGGGAG CCAGAGCAGA TCAGTTTGCT GGAGATCCTG
CAGGTAGCGG ACGGCAAAGG ACTGCTGTTG AACCAGTGTC TGGAAAGCGA AGGCGTCTGC
ACCCATCAGG GAACCTGCAC GGTGCACGAC GCCATGAAAA AGCTGCAAAA CGTGATGGAA
AACCATCTGA AAGCCATCAC TTTCGATCAA CTTATCTGA
|
|---|
| Protein sequence | MITREADYCI RTILHLSRPE QRKHPVPVDE LSRQMTIPAP FLRKILAKLI NADLVHSHRG
RNGGLTIKGE PEQISLLEIL QVADGKGLLL NQCLESEGVC THQGTCTVHD AMKKLQNVME
NHLKAITFDQ LI
|
|---|
| |