| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0884 |
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| Symbol | ribB |
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| ID | 3724181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1040807 |
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| End bp | 1041460 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637750477 |
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| Product | 3,4 dihydroxy-2-butanone-4-phosphate synthase |
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| Protein accession | YP_356309 |
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| Protein GI | 77918494 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.000650925 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCAAT CTCTGCTCGA CCGCTTCGGA ACCCCTCTTG AACGTGTTCA CCTCGCCATC
GATCGCCTGC GTCAGGGACG CGGAGTGCTC TTGGTCGACG ATGAAAACCG TGAAAACGAA
GGCGATCTGA TCTTCCCCGC CGAAACCATC ACCCCCGCCC AGATGGCCAT GATGATCCGG
GAATGCAGCG GTATCGTCTG TTTGTGCCTG ACCGAAGACA AACTCAAACA ACTTGAGTTG
CCCCAAATGG TAAGCGACAA TACCAGCGCC AATCAGACAG CCTTCACCCT CTCCATCGAA
GCTCGGCAGG GCGTCACCAC CGGGGTTTCG GCAGCCGACC GCGTCACCAC CATCCGCACC
GCCGTAGCCG ACGATTGCCG GCCCGACGAT CTGGCCCGTC CGGGCCATGT TTTCCCCCTG
CGAGCCCGTC CCGGCGGCGT GCTGACACGA CGCGGACACA CCGAAGGTAC CGTCGACCTG
ATGCGAATGG CCGGATACAA ACCGGCAGGA GTCCTGTGCG AACTGACCAA CGAAGATGGT
ACCATGGCCC GCCTGCCCGA AATCATCACC TTCGCCGAGC GCCATTACCT CAGCGTGGTC
AGCATTGAAG ACCTGGCCCT GGCCCTTGAA TCCCACATGG AAAAATCGGC ATGA
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| Protein sequence | MSQSLLDRFG TPLERVHLAI DRLRQGRGVL LVDDENRENE GDLIFPAETI TPAQMAMMIR
ECSGIVCLCL TEDKLKQLEL PQMVSDNTSA NQTAFTLSIE ARQGVTTGVS AADRVTTIRT
AVADDCRPDD LARPGHVFPL RARPGGVLTR RGHTEGTVDL MRMAGYKPAG VLCELTNEDG
TMARLPEIIT FAERHYLSVV SIEDLALALE SHMEKSA
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