| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0871 |
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| Symbol | |
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| ID | 3724207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1026597 |
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| End bp | 1027733 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637750464 |
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| Product | putative protein transport, PilT-like |
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| Protein accession | YP_356296 |
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| Protein GI | 77918481 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCG ATTCACCCAT CGAAATAAAG GTGGCGAAAC CGGCGCGGAT GGAGGAACTG
CTGTGCGCGA CCGTTGACAG GGATGCTTCG GACCTTCATC TGACGGCGGG TATGCCGCCG
GTTTTTCGCA TGCGAGGAGA ACTGACGGTC ATGAATTGCG ATGCCTACGG GCCGGAGGAG
ATCGAAACGC TGGTGAACGA GATCCTTACC ACCCGCCACA AGGAGGTGCT GCGGACCAAA
AAATCAGTGG ACTTCGCCAT CAGCGCCACT GAAGTCGGGC GGTTCAGGGT TGCCGTCTAC
CATCAGCGCG GCGCTTTGAG CGTAGCGTTG CGTTTGCTGG CCAAGGGTAT CCCCTCTTTT
GGCCGTCTCG GCCTGCCGGA GAGCGTCAAC CGCCTGTCGG GCCTGCGGGA CGGCCTGGTG
CTGGTGACCG GGGTAACCGG TTCGGGGAAA TCGACTACCC TGGCCACGGT GATCGACGAT
ATCAACGCCA AGCACCGTCG TCACATTATC ACCATCGAGG ACCCCATCGA ATACATCCAT
CAAAACAATC GCTGCATCAT CAACCAGCGC GAACTGCACA CCGACGTGCC GTCCTTCAGC
GACGCCTTGA GGGATTCTCT GCGGGCCGAC CCGGACGTCA TCCTGGTCGG CGAGATGCGT
GACCTGGAAA CTATGCGTAC GGCCATCATG GCGGCGGAAA CCGGTCACCT GGTCTTTTCC
ACTCTCCATT CCCGGGACTG CGTCTCCACC GTCAACCGCC TGGTGGGAGC CTTCCCGGCC
GGGGAGCAGG CGCAGATTCG CCAGCAACTG TCGTCGACCC TGGTGGCGGT GGTGTCTCAG
CGTCTGTTGC CGACGGCTGG CGGCAGCGGA CGGGTGCCGG CGGTGGAGGT GATGTTTTCC
ACGCCCGGCA TCTCCAACCT TATCCGCCAG GGCAAGGACG ACATGATCTA TTCAGCCATC
GAGACCGGCG CCAAACTGGG GATGCAGACC ATGGAACAGA GTCTGCTGGG CCTTGTCGAG
AAGGGCAGGA TCGGGCTGGA GACCGGTGTC GACGCGGCCC GCAACGGCAC TCTGCTGAGG
CAGAGGTTTT CCCGCTCGCG TGCCGTGGGT TCGGCAACCG GCGGCGTGAA GGGGTGA
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| Protein sequence | MSIDSPIEIK VAKPARMEEL LCATVDRDAS DLHLTAGMPP VFRMRGELTV MNCDAYGPEE
IETLVNEILT TRHKEVLRTK KSVDFAISAT EVGRFRVAVY HQRGALSVAL RLLAKGIPSF
GRLGLPESVN RLSGLRDGLV LVTGVTGSGK STTLATVIDD INAKHRRHII TIEDPIEYIH
QNNRCIINQR ELHTDVPSFS DALRDSLRAD PDVILVGEMR DLETMRTAIM AAETGHLVFS
TLHSRDCVST VNRLVGAFPA GEQAQIRQQL SSTLVAVVSQ RLLPTAGGSG RVPAVEVMFS
TPGISNLIRQ GKDDMIYSAI ETGAKLGMQT MEQSLLGLVE KGRIGLETGV DAARNGTLLR
QRFSRSRAVG SATGGVKG
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