| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0867 |
|---|
| Symbol | |
|---|
| ID | 3724203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1022267 |
|---|
| End bp | 1023778 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637750460 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_356292 |
|---|
| Protein GI | 77918477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAA AATTGCTCCA ACAGAAAATC GTCGCTTTTG AGGTGACGGG CAGCGAGGTT
CGGGCCGCCA TCGTGGCTAA AAGCGGCCGG AAGTTTCGGG TGCTTGATTT TGCCTCGATA
AAGCGCGCTA ACCATGAGGA GGATTTGCCA GAGGTGGATG CCCTCCGCCA GCTTGCCAGG
CGCCTCAACC TGACCGGTGG CAAGGTGGTT TTCGTTACCC CTTTGGCGCG CGCCTTCGAG
CTGTTCATGG ACCGGCGGAA AATCTCCAAT CTAAAACACT ACCAGTTGCT GGAAGCGGTT
CGGTGGGAGG TCGAGCCCTA TACCGGCATC TCCGGGCAGA ACGCCCTGCT TGGAGCGGAG
CGCGAACGTA AACCCAAACT GGGCCCCGGC GAGATCGCGC CTGAGGAGAG CGATGAGCAG
ACAGTGACCG TTTCGGCCAT CGAGCGCAAT ATCTATCGGG CGGCCAAAGC GCGCTTTAAG
GCGGTCGGCT TCTCCCTGGT CCGCATCTAC CCGCCGGACG TGTCGTTCTT CATGCCCCTG
CACCTTGACG CCGGCGCCGC GCCGCGCGCC ATTCTCGAGG TCGGGGAGGA CTATTCCAAC
TTTGCCATCC TGCGCGGCGG CATCCCGGAG CAGATCAACA CCCTGAGTAT CAGCCTCGAT
ACCATCAGTT CCCACCTGAA CGGCGAATCC CCGGTCGAAG GGCTCGAGGA AACCCTCAAA
TTTACGGTTC GCCAGGCCCC TTCCCAGGAG GCTCTCCTCG TTTCCGGCAG CGGCGCGGGC
AACGAAGAGG TGCTGAGCTA CATTGCCGGG TTCTGCCCCC ATGGCGCCAA ACCTCTGTGC
CTGTCCCGTT CGGCCGCCTT CACCGACTCG GTGGGCGATG CCGCCAGCGC GGCTTTCGGA
ACCGTGGTCG GGGCTGGCGT GCGGGAGCTG CGGGGGGCGC GGGAACGGCT GATCGGCATC
AGTGATCGCG AGGCCCTGGT GCCGCGCCTG AAAAAGAGCG CCTACCTCAT GCCTCTGGTG
GTTACGGGAA TTTTCGTGAT TTTCCTCGGC GGCCACTACC TGTTTATGAA GCATCAGGAT
AGGGCCTACA AGCAACGCAT CGACGAACTG AGCGAACAGC TGAAATCCCG CAAAAGACAG
GTAGAAAAAT ACGACGGTCT GCTCGCGCAA CTGAAAAAGC TCGAGGCGGA TATTGCCTTC
ACCGAAAACA AGATCGTTTT TTTCGAACGG GAGGCCGACA GGGTGATTGT CCACGTCATC
GCCTGTCTGC GAGGCATCGG TGCCGTGGTG CCGGAAAACG TGGTCCTGAC GACCGTGACG
GGCGACGCCA TAGAGCGGGA GTTTCTGGTC AGCGGCCAGT GCTTCGATCA GAAGGAGATC
GGCTTGTTCG CCTCGGCTCT GCAGAAAAAG CCCTGGTGCG AATCGGCGGT TATTCAGAAG
GTCGAGGCCG ATGGGCAGGA AGGCGTGCTG ACATTTGAGT TGACGGTTAA AACAAGGTTG
GAAAAATCAT GA
|
|---|
| Protein sequence | MNPKLLQQKI VAFEVTGSEV RAAIVAKSGR KFRVLDFASI KRANHEEDLP EVDALRQLAR
RLNLTGGKVV FVTPLARAFE LFMDRRKISN LKHYQLLEAV RWEVEPYTGI SGQNALLGAE
RERKPKLGPG EIAPEESDEQ TVTVSAIERN IYRAAKARFK AVGFSLVRIY PPDVSFFMPL
HLDAGAAPRA ILEVGEDYSN FAILRGGIPE QINTLSISLD TISSHLNGES PVEGLEETLK
FTVRQAPSQE ALLVSGSGAG NEEVLSYIAG FCPHGAKPLC LSRSAAFTDS VGDAASAAFG
TVVGAGVREL RGARERLIGI SDREALVPRL KKSAYLMPLV VTGIFVIFLG GHYLFMKHQD
RAYKQRIDEL SEQLKSRKRQ VEKYDGLLAQ LKKLEADIAF TENKIVFFER EADRVIVHVI
ACLRGIGAVV PENVVLTTVT GDAIEREFLV SGQCFDQKEI GLFASALQKK PWCESAVIQK
VEADGQEGVL TFELTVKTRL EKS
|
|---|
| |