Gene Pcar_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0856 
Symbol 
ID3722854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1009433 
End bp1010170 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content61% 
IMG OID637750449 
ProductABC-type transport system, permease component 
Protein accessionYP_356281 
Protein GI77918466 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.376745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACC TGTTTTCGTT CTGCATTCTG CTGGGAATCT GGTACGCCGG AACCCTGTTT 
TTCGGTGCCA ACCTGGTACC GACACCAACC CAAACCCTGG CTTGTCTGGC GGAATTAACC
ACCACTCTCA ACTTCTGGGC GAATATCGCC ATCACTATCT TTCGGGGTGT GCTGGCCCTG
GGAATCAGCG TAACGACCGC ACTGGTACTC GGCCTCGCCG CCGGCCGCAG CAAACGGGCC
ATGGCCCTGA CCGGGCCGCT GGTCGCGGCG CTGCAAGCTT CTCCCCCCAT CTTGTGGATC
ACCCTCCTGA TGGTATGGGT CGGCACGGGC AGCAAGGTTC CGATCACGGT AGTGGTGGCC
TCCCTGCTTC CCCCCTTGTT TGCCACCGTC GCCCAGAGTG CCGCGGTAGT GGACCATCGC
CTGTTCGAGT TGGCATCCGT CTACCGGGTC AAACGAAGCC GCATCCTGAC CGATATTCTG
TTACGCGGCA TCTATCCTTC CCTGCTGGGC GGATTTTCCT ATGCCCTGGG AAGCTGCTGG
AAAATCGCCG CTGTGGCGGA ATTCCTCGGC TCGTCACAAG GCATCGGTGC CAGGATCTAC
TGGAGCTATC GCATGCTCAA CATGCCGGAA TTGTTCGCTT GGGCAACGGT CCTCGTCGGC
CTCGGCATGG CCGTGGAACT GGGCCTGATC CGCCCCTTGC GCAACCGGGC CGAAACAAGG
ACGGGCACAC ATGCTTAG
 
Protein sequence
MAYLFSFCIL LGIWYAGTLF FGANLVPTPT QTLACLAELT TTLNFWANIA ITIFRGVLAL 
GISVTTALVL GLAAGRSKRA MALTGPLVAA LQASPPILWI TLLMVWVGTG SKVPITVVVA
SLLPPLFATV AQSAAVVDHR LFELASVYRV KRSRILTDIL LRGIYPSLLG GFSYALGSCW
KIAAVAEFLG SSQGIGARIY WSYRMLNMPE LFAWATVLVG LGMAVELGLI RPLRNRAETR
TGTHA