Gene Pcar_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0841 
Symbol 
ID3722839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp993608 
End bp995197 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content59% 
IMG OID637750435 
Productgroup II intron-encoding maturase 
Protein accessionYP_356267 
Protein GI77918452 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000535871 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGGG TATGTGGAAG GAAGGTCACG CGTCTTACCC TGGGAGATCT GTCAACCTGC 
CTCGTGCTAC CGGCATCGCA AGGTGTCGGG ATGGGTTGGC AGAAGTCAGC AGAGGCCATA
ATAGCCGGGC TAACCACTTT GGCGAAGGGC CGAACACGAG GCGCTTTTCA GGAGGCACGA
ATTTCGATGA CGATCGAAGA AGCAGAAGCC CTGGTTGAGA TGCCGGGGGC CATGTCCGAG
GGTAGCGACC GGAAGTCGCG AGAGTACGGC ATCGGTGCGT CAAACGTCAC GGCATGCAGT
GAATCATCCT GGACGGAAGT GGCAACGCGG CTGATGGAAG AAGTCGTCAG TCGCGGCAAC
ATGATGGCGG CTTACCAGCG AGTGGTCAGG AACAAGGGCG CGGCGGGCAT CGACGGAATG
CCGGTTGGCG ACCTTAAGAC CTACCTGCAG GAGCAGTGGC CGCGCATCAA AGAAGAACTG
CTGACCGGAA CCTACCAGCC TCAGCCGGTG CGGAAGGTGG AAATTCCCAA GCCCGGTGGC
GGGATGCGTA TGCTCGGCAT TCCCACGGTG CTGGATCGGC TCATTCAGCA GGCGCTGCAT
CAGGAGCTGA TGCGGCTGTT TGAACCGGAA TTCTCCGAGC ACTCCTACGG GTTTCGTCCC
GGACGGAGCG CCCACCAAGC CGTTCAGTCC GCCCGCCGGC ACGTAGCCTC CGGGCGGCGC
TGGGCGGTCG ATATCGACTT GGAGAAATTC TTTGACCGCG TGGGCCACGA CATACTCATG
TCGCGGGTGG CCCGCAAAGT CAAAGACCGC CGGGTATTAG GGTTGATTCG CCGATATCTG
ACGGTCGGTG TGCTTGAAGG GGGGATTATT TCGCCAAGGG TACAGGGGAC GCCGCAGGGC
GGCCCTCTCT CGCCCCTGCT GTCGAACATC CTTCTCGACG AGTTTGACAA GGAACTGGAG
AGGCGGGGCC ATGCCTTCTG TCGCTATGCC GACGACTGCA ATATTTACGT GCATAGTCGC
CGGGCGGCCG AGCGAGTCAT GACCTCGTTG ACACGGTTTC TGGAACAGCA GCTCAAGCTC
AAAGTCAACC GCGTCAAAAG CGCCGTTGGC CGCCCCTGGG AAAGAACCTT TCTAGGCTAC
AGCATGACCT CTCACAAAAA GCCCCGTCTG AAAGTGGCGG GATCTTCCGT GAAGCGGTTC
AAGACTAGCC TGCGAGAAAT CTTTCGGCGG GGAAGGGGAC GCCGTCTCAA GCGGGTCATC
GAAGAGTCCA CTCCGAAGCT TCGAGGTTGG ATCGCCTACT TTCGCCTGGC GGAGGTTAAG
GGTATCTTCG AGGATCTTGA TGGTTGGATC AGGCGGAAAC TGCGCTGCAT TCTGTGGCGA
CAGTGGAAGC GCCCCTTTAC CCGAGCCAGG AATTTGATGC GGCGGGGATT GCCAGAGCAT
CGGGCGTGGC GATCCGCCAC AAATGAGCGA GGCCCCTGGT GGAACTCAGG AGCCTCGCAT
ATGCACGATG CACTTCGGAA ATCCTACTTC GACAGACTGG GGTTGGTCTC GTTAGTAGAT
TACCGCAGAC GCTTTCAGTG CGCTTTGTGA
 
Protein sequence
MRRVCGRKVT RLTLGDLSTC LVLPASQGVG MGWQKSAEAI IAGLTTLAKG RTRGAFQEAR 
ISMTIEEAEA LVEMPGAMSE GSDRKSREYG IGASNVTACS ESSWTEVATR LMEEVVSRGN
MMAAYQRVVR NKGAAGIDGM PVGDLKTYLQ EQWPRIKEEL LTGTYQPQPV RKVEIPKPGG
GMRMLGIPTV LDRLIQQALH QELMRLFEPE FSEHSYGFRP GRSAHQAVQS ARRHVASGRR
WAVDIDLEKF FDRVGHDILM SRVARKVKDR RVLGLIRRYL TVGVLEGGII SPRVQGTPQG
GPLSPLLSNI LLDEFDKELE RRGHAFCRYA DDCNIYVHSR RAAERVMTSL TRFLEQQLKL
KVNRVKSAVG RPWERTFLGY SMTSHKKPRL KVAGSSVKRF KTSLREIFRR GRGRRLKRVI
EESTPKLRGW IAYFRLAEVK GIFEDLDGWI RRKLRCILWR QWKRPFTRAR NLMRRGLPEH
RAWRSATNER GPWWNSGASH MHDALRKSYF DRLGLVSLVD YRRRFQCAL